RNA–Protein interactions for RNA: ENST00000575022.1

FBXO39-203, Transcript of F-box protein 39, humanhuman

TSL 1 (best)

Gene FBXO39, Length 1,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39-203ENST00000575022 MMS19Q96T76 1030 aa11.29□□□□□ -0.6
FBXO39-203ENST00000575022 NAA15Q9BXJ9 866 aaKnown RBP11.29□□□□□ -0.6
FBXO39-203ENST00000575022 NIF3L1Q9GZT8 377 aa11.29□□□□□ -0.6
FBXO39-203ENST00000575022 DNAJB4Q9UDY4 337 aa11.29□□□□□ -0.6
FBXO39-203ENST00000575022 LRRC53A6NM62 1247 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 I3L4J1 428 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 FOXN3O00409 490 aaPredicted RBP11.28□□□□□ -0.6
FBXO39-203ENST00000575022 CD58P19256 250 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 LRPAP1P30533 357 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 RPL9P32969 192 aaKnown RBP11.28□□□□□ -0.6
FBXO39-203ENST00000575022 PBX3P40426 434 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 TAF6P49848 677 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 CDH8P55286 799 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 TNNC1P63316 161 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 ZBED6P86452 979 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 CUL2Q13617 745 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 UPP1Q16831 310 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 FIGNQ5HY92 759 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 SPOUT1Q5T280 376 aaKnown RBP11.28□□□□□ -0.6
FBXO39-203ENST00000575022 PDXDC1Q6P996 788 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 COLGALT2Q8IYK4 626 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 TC2NQ8N9U0 490 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 HERVK_113Q902F9 699 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 IQCDQ96DY2 449 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 ZNF560Q96MR9 790 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 ZNF830Q96NB3 372 aaPredicted RBP11.28□□□□□ -0.6
FBXO39-203ENST00000575022 YME1L1Q96TA2 773 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 STK33Q9BYT3 514 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 SMYD3Q9H7B4 428 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 PRG3Q9Y2Y8 225 aaPredicted RBP11.28□□□□□ -0.6
FBXO39-203ENST00000575022 SNX9Q9Y5X1 595 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 SLC4A7Q9Y6M7 1214 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 ALPK3Q96L96 1907 aa11.28□□□□□ -0.6
FBXO39-203ENST00000575022 TET1Q8NFU7 2136 aa11.27□□□□□ -0.6
FBXO39-203ENST00000575022 KPNA7A9QM74 516 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 NT5C1B-RDH14C9J2C7 533 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 B3GAT3O94766 335 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 GFPT2O94808 682 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 CALCAP01258 141 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 KRT5P13647 590 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 P4HA1P13674 534 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 ATP2A2P16615 1042 aaKnown RBP11.27□□□□□ -0.61
FBXO39-203ENST00000575022 PNPLA4P41247 253 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 STAT1P42224 750 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 ASPAP45381 313 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 BRCC3P46736 316 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 GSDMDP57764 484 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 LILRA4P59901 499 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 GCNT1Q02742 428 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 DSC1Q08554 894 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 BTG3Q14201 252 aaPredicted RBP11.27□□□□□ -0.61
FBXO39-203ENST00000575022 SV2CQ496J9 727 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 INTS6LQ5JSJ4 861 aaKnown RBP11.27□□□□□ -0.61
FBXO39-203ENST00000575022 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 DCLRE1AQ6PJP8 1040 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 DSTYKQ6XUX3 929 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 CNGA4Q8IV77 575 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 LRRC43Q8N309 656 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 C3orf58Q8NDZ4 430 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 OR8K1Q8NGG5 319 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 UROC1Q96N76 676 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 MRPL9Q9BYD2 267 aaKnown RBP11.27□□□□□ -0.61
FBXO39-203ENST00000575022 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 SDCBP2Q9H190 292 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 PCDHB4Q9Y5E5 795 aa11.27□□□□□ -0.61
FBXO39-203ENST00000575022 FIGNL2A6NMB9 653 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 F8VZ95 297 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 H0YGN5 161 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 CYB561D2O14569 222 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 NRP1O14786 923 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 HUS1O60921 280 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 TADA2AO75478 443 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 KIF4AO95239 1232 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 STAU1O95793 577 aaKnown RBP11.26□□□□□ -0.61
FBXO39-203ENST00000575022 ALDH2P05091 517 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 ITGB1P05556 798 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 SKILP12757 684 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 RFX1P22670 979 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 TBXAS1P24557 533 aaPredicted RBP11.26□□□□□ -0.61
FBXO39-203ENST00000575022 SOX5P35711 763 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 SLC11A1P49279 550 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 JAM2P57087 298 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 ORC1Q13415 861 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 SHHQ15465 462 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 ASIC2Q16515 512 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 TIGD5Q53EQ6 642 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 E4F1Q66K89 784 aaPredicted RBP11.26□□□□□ -0.61
FBXO39-203ENST00000575022 CD300LGQ6UXG3 332 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 HERC6Q8IVU3 1022 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 EPS8L1Q8TE68 723 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 ZNF689Q96CS4 500 aaPredicted RBP11.26□□□□□ -0.61
FBXO39-203ENST00000575022 SENP8Q96LD8 212 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 DNAJC7Q99615 494 aa11.26□□□□□ -0.61
FBXO39-203ENST00000575022 MRPL45Q9BRJ2 306 aaKnown RBP11.26□□□□□ -0.61
FBXO39-203ENST00000575022 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms