RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 CDKN1CP49918 316 aaPredicted RBP5.55□□□□□ -1.52
PRPF8-211ENST00000574728 LINC00310P59036 64 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 FAPQ12884 760 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 SMAD4Q13485 552 aaKnown RBP5.55□□□□□ -1.52
PRPF8-211ENST00000574728 KIF22Q14807 665 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 ARHGEF6Q15052 776 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 NECTIN1Q15223 517 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 TERF2Q15554 542 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 KCNA10Q16322 511 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 SLC9C1Q4G0N8 1177 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 BROXQ5VW32 411 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 SLFN13Q68D06 897 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 ESRP1Q6NXG1 681 aaKnown RBP5.55□□□□□ -1.52
PRPF8-211ENST00000574728 LHFPL2Q6ZUX7 228 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 NECAB2Q7Z6G3 386 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 CILP2Q8IUL8 1156 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 MB21D2Q8IYB1 491 aaPredicted RBP5.55□□□□□ -1.52
PRPF8-211ENST00000574728 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 MB21D1Q8N884 522 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 ENAHQ8N8S7 591 aaPredicted RBP5.55□□□□□ -1.52
PRPF8-211ENST00000574728 ZNF610Q8N9Z0 462 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 WDR48Q8TAF3 677 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 CALML6Q8TD86 181 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 FNIP1Q8TF40 1166 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 ZSWIM3Q96MP5 696 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 SLF1Q9BQI6 1058 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 ZNF287Q9HBT7 754 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 GALNT8Q9NY28 637 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 USP36Q9P275 1121 aaKnown RBP5.55□□□□□ -1.52
PRPF8-211ENST00000574728 CROTQ9UKG9 612 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 MGAMO43451 1857 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 LAMA4Q16363 1823 aa5.55□□□□□ -1.52
PRPF8-211ENST00000574728 ZNF236Q9UL36 1845 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 TSPY2A6NKD2 308 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 TMEM232C9JQI7 657 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 E7EWF7 191 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 ZNF213O14771 459 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 MPIG6BO95866 241 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 HMGCRP04035 888 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 GJB1P08034 283 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 SLC3A2P08195 630 aaKnown RBP5.54□□□□□ -1.52
PRPF8-211ENST00000574728 PDHBP11177 359 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 TOP1P11387 765 aaKnown RBP5.54□□□□□ -1.52
PRPF8-211ENST00000574728 CYP2B6P20813 491 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 ADORA2AP29274 412 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 THBS2P35442 1172 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 GLRBP48167 497 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 NT5C2P49902 561 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 ALDH6A1Q02252 535 aaKnown RBP5.54□□□□□ -1.52
PRPF8-211ENST00000574728 ZNF543Q08ER8 600 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 TTC38Q5R3I4 469 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 MFSD6Q6ZSS7 791 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 RTN4RL1Q86UN2 441 aaPredicted RBP5.54□□□□□ -1.52
PRPF8-211ENST00000574728 DGKHQ86XP1 1220 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 PHYKPLQ8IUZ5 450 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 ABRAQ8N0Z2 381 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 RAET1EQ8TD07 263 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 SOCS4Q8WXH5 440 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 COA7Q96BR5 231 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 FOXRED1Q96CU9 486 aaPredicted RBP5.54□□□□□ -1.52
PRPF8-211ENST00000574728 TTC14Q96N46 770 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 FOXB1Q99853 325 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 KATNBL1Q9H079 304 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 RANBP17Q9H2T7 1088 aaKnown RBP5.54□□□□□ -1.52
PRPF8-211ENST00000574728 MROH8Q9H579 483 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 SLC5A4Q9NY91 659 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 ZFP69BQ9UJL9 534 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 FEM1BQ9UK73 627 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 STX8Q9UNK0 236 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 NOC2LQ9Y3T9 749 aaKnown RBP5.54□□□□□ -1.52
PRPF8-211ENST00000574728 RBM8AQ9Y5S9 174 aaKnown RBP5.54□□□□□ -1.52
PRPF8-211ENST00000574728 CHD9Q3L8U1 2897 aa5.54□□□□□ -1.52
PRPF8-211ENST00000574728 MYH8P13535 1937 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 STRNO43815 780 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 SLC25A27O95847 323 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 PRLP01236 227 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 PGK2P07205 417 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 COL6A1P12109 1028 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 CYBAP13498 195 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 CCND3P30281 292 aaPredicted RBP5.53□□□□□ -1.52
PRPF8-211ENST00000574728 RGS2P41220 211 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 GUCY2FP51841 1108 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 OAZ1P54368 228 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 SNAP25P60880 206 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 CCNA1P78396 465 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 ROM1Q03395 351 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 TROAPQ12815 778 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 RRP12Q5JTH9 1297 aaKnown RBP5.53□□□□□ -1.52
PRPF8-211ENST00000574728 ERICH6BQ5W0A0 696 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 TIGD7Q6NT04 549 aaPredicted RBP5.53□□□□□ -1.52
PRPF8-211ENST00000574728 FRMD7Q6ZUT3 714 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 RASSF3Q86WH2 238 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 TMEM151BQ8IW70 566 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 CLRN3Q8NCR9 226 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 U2AF1L4Q8WU68 220 aaKnown RBP5.53□□□□□ -1.52
PRPF8-211ENST00000574728 ESR2Q92731 530 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 MAML3Q96JK9 1138 aa5.53□□□□□ -1.52
PRPF8-211ENST00000574728 CCDC136Q96JN2 1154 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms