RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 FOXD4L5Q5VV16 416 aaPredicted RBP22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 LRRTM3Q86VH5 581 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 C1orf127Q8N9H9 656 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 C2orf15Q8WU43 125 aaKnown RBP22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 FOXD4L4Q8WXT5 416 aaPredicted RBP22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 ZNF396Q96N95 335 aaPredicted RBP22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 TMEM206Q9H813 350 aa22.77■■□□□ 1.24
CHRNB1-206ENST00000574054 TCHHQ07283 1943 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 HAPLN1P10915 354 aaPredicted RBP22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 CYP4F8P98187 520 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 MTAPQ13126 283 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 FZD5Q13467 585 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 STXBP4Q6ZWJ1 553 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 CSGALNACT2Q8N6G5 542 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 SPPL2BQ8TCT7 592 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 ATRIPQ8WXE1 791 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 MKNK1Q9BUB5 465 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 LRRC27Q9C0I9 530 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 PDE11AQ9HCR9 933 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 OTOGLQ3ZCN5 2332 aa22.76■■□□□ 1.23
CHRNB1-206ENST00000574054 PATJQ8NI35 1801 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 TICRRQ7Z2Z1 1910 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 CHADO15335 359 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 HUS1O60921 280 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 KRT19P08727 400 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 TMEM191BP0C7N4 346 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 CCNE1P24864 410 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 CDC25CP30307 473 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 KPNA1P52294 538 aaPredicted RBP22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 TSSK4Q6SA08 328 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 PDCL2Q8N4E4 241 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 GLIS3Q8NEA6 775 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 HPS3Q969F9 1004 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 DHX58Q96C10 678 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 TNMDQ9H2S6 317 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 ITGA11Q9UKX5 1188 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 L1RE1Q9UN81 338 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 PCDHB5Q9Y5E4 795 aa22.75■■□□□ 1.23
CHRNB1-206ENST00000574054 SLC38A8A6NNN8 435 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 ARNTLO00327 626 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 ASIC1P78348 528 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 FCHO2Q0JRZ9 810 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 FOXD4L6Q3SYB3 417 aaPredicted RBP22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 FOXD4L3Q6VB84 417 aaPredicted RBP22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 ZNF687Q8N1G0 1237 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 GPD1LQ8N335 351 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 LRRC52Q8N7C0 313 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 TTC8Q8TAM2 541 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 ZFYVE19Q96K21 471 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 MTMR12Q9C0I1 747 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 CHRDQ9H2X0 955 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 TASP1Q9H6P5 420 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 LMAN1LQ9HAT1 526 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 TMLHEQ9NVH6 421 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 ZSCAN32Q9NX65 697 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 PCDHGA2Q9Y5H1 932 aa22.74■■□□□ 1.23
CHRNB1-206ENST00000574054 PRAMEF12O95522 483 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 ACAT1P24752 427 aaKnown RBP22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 SOX9P48436 509 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 RBP5P82980 135 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 LMBRD2Q68DH5 695 aaPredicted RBP22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 SCARA3Q6AZY7 606 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 KIAA2013Q8IYS2 634 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 LRRC3BQ96PB8 259 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 PI4K2AQ9BTU6 479 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 CUEDC2Q9H467 287 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 IL21Q9HBE4 155 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 PRMT8Q9NR22 394 aaPredicted RBP22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 DDX43Q9NXZ2 648 aaKnown RBP22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 R3HCC1Q9Y3T6 440 aaKnown RBP22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 FANCMQ8IYD8 2048 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 COL4A2P08572 1712 aa22.73■■□□□ 1.23
CHRNB1-206ENST00000574054 CUTAO60888 179 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 PPP6R2O75170 966 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 PRPF40AO75400 957 aaKnown RBP22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 YEATS4O95619 227 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 HSP90AA1P07900 732 aaKnown RBP22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 AMPD3Q01432 767 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 E2F4Q16254 413 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 NFE2Q16621 373 aaPredicted RBP22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 ARHGAP29Q52LW3 1261 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 RUBCNQ92622 972 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 ANKRD36BP1Q96IX9 119 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 TRIM9Q9C026 710 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 SMG9Q9H0W8 520 aaKnown RBP22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 C8orf33Q9H7E9 229 aaPredicted RBP22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 KBTBD4Q9NVX7 518 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 SIX4Q9UIU6 781 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 SNX9Q9Y5X1 595 aa22.72■■□□□ 1.23
CHRNB1-206ENST00000574054 KIAA0391O15091 583 aaKnown RBP22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 GPR15P49685 360 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 MYL7Q01449 175 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 HSCBQ8IWL3 235 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 ADGRF2Q8IZF7 708 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 TMEM86AQ8N2M4 240 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 DCLK2Q8N568 766 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 IQUBQ8NA54 791 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 SUMF1Q8NBK3 374 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 STKLD1Q8NE28 680 aa22.71■■□□□ 1.23
CHRNB1-206ENST00000574054 MSANTD3Q96H12 275 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms