RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 DLGAP2Q9P1A6 1054 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 DSEQ9UL01 958 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 SIT1Q9Y3P8 196 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 MIA3Q5JRA6 1907 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 FAM186AA6NE01 2351 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 MYO15AQ9UKN7 3530 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 TICRRQ7Z2Z1 1910 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 ZNF233A6NK53 670 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 HEPACAM2A8MVW5 462 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 ATP2C2O75185 946 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 HAPLN1P10915 354 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-214ENST00000574003 TARSP26639 723 aaKnown RBP12.18□□□□□ -0.46
RPAIN-214ENST00000574003 GDI1P31150 447 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 CASP4P49662 377 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 RBP5P82980 135 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 STK4Q13043 487 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 GPR158Q5T848 1215 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 PHLDB3Q6NSJ2 640 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 TPRG1Q6ZUI0 275 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 STXBP4Q6ZWJ1 553 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 CEP57L1Q8IYX8 460 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 KIAA0895Q8NCT3 520 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 PJA1Q8NG27 643 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 PLEKHO2Q8TD55 490 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 PSMG2Q969U7 264 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 CCDC127Q96BQ5 260 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 LRRC3BQ96PB8 259 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 OXCT2Q9BYC2 517 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-214ENST00000574003 GZF1Q9H116 711 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-214ENST00000574003 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 DDX43Q9NXZ2 648 aaKnown RBP12.18□□□□□ -0.46
RPAIN-214ENST00000574003 ITGA11Q9UKX5 1188 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 NME7Q9Y5B8 376 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 DMDP11532 3685 aa12.18□□□□□ -0.46
RPAIN-214ENST00000574003 VPS13AQ96RL7 3174 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 KANSL1LA0AUZ9 987 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 MYBPHLA2RUH7 354 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 FAM170BA6NMN3 283 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 GFRA3O60609 400 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 HUS1O60921 280 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 PRPF40AO75400 957 aaKnown RBP12.17□□□□□ -0.46
RPAIN-214ENST00000574003 MICAL2O94851 1124 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 CST3P01034 146 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-214ENST00000574003 SLFN14P0C7P3 912 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 PAX3P23760 479 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 CYP2F1P24903 491 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 LMO2P25791 158 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 PNPLA4P41247 253 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 NDUFA8P51970 172 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 NUBP1P53384 320 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 PSMC1P62191 440 aaKnown RBP12.17□□□□□ -0.46
RPAIN-214ENST00000574003 CYP24A1Q07973 514 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 SNRNP35Q16560 246 aaKnown RBP12.17□□□□□ -0.46
RPAIN-214ENST00000574003 DDR2Q16832 855 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 SOWAHAQ2M3V2 549 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 INTS6LQ5JSJ4 861 aaKnown RBP12.17□□□□□ -0.46
RPAIN-214ENST00000574003 ATL3Q6DD88 541 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 ASCL5Q7RTU5 278 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 ADGRF2Q8IZF7 708 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 LRRC52Q8N7C0 313 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 TTC8Q8TAM2 541 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 ZNF516Q92618 1163 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 HPDLQ96IR7 371 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 ANKRD36BP1Q96IX9 119 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 ZFYVE19Q96K21 471 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 SPATA32Q96LK8 384 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 PKMYT1Q99640 499 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 DDX23Q9BUQ8 820 aaKnown RBP12.17□□□□□ -0.46
RPAIN-214ENST00000574003 TRMT61BQ9BVS5 477 aaKnown RBP12.17□□□□□ -0.46
RPAIN-214ENST00000574003 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 BRD9Q9H8M2 597 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 MAGEF1Q9HAY2 307 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 GTF3C4Q9UKN8 822 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 USP34Q70CQ2 3546 aa12.17□□□□□ -0.46
RPAIN-214ENST00000574003 EP300Q09472 2414 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-214ENST00000574003 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 PRAMEF12O95522 483 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 TNNC2P02585 160 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 HMGA1P17096 107 aaKnown RBP12.16□□□□□ -0.46
RPAIN-214ENST00000574003 TNNI1P19237 187 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 CMA1P23946 247 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 SOX9P48436 509 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 TUFMP49411 452 aaKnown RBP12.16□□□□□ -0.46
RPAIN-214ENST00000574003 TSPY1Q01534 308 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 PFKPQ01813 784 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 DUOXA2Q1HG44 320 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 BMT2Q1RMZ1 405 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 TMEM150AQ86TG1 271 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 ARID3BQ8IVW6 561 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-214ENST00000574003 DCP1BQ8IZD4 617 aaKnown RBP12.16□□□□□ -0.46
RPAIN-214ENST00000574003 XXYLT1Q8NBI6 393 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 LEMD2Q8NC56 503 aa12.16□□□□□ -0.46
RPAIN-214ENST00000574003 KBTBD7Q8WVZ9 684 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms