RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FAXDC2Q96IV6 333 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ACBD6Q9BR61 282 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 IRF2BPLQ9H1B7 796 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 ADAM7Q9H2U9 754 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 THAP9Q9H5L6 903 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 MMRN2Q9H8L6 949 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 MAGEC2Q9UBF1 373 aaPredicted RBP11.82□□□□□ -0.52
CHD3-216ENST00000573936 AFF4Q9UHB7 1163 aaKnown RBP11.82□□□□□ -0.52
CHD3-216ENST00000573936 FBXW11Q9UKB1 542 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 L1RE1Q9UN81 338 aa11.82□□□□□ -0.52
CHD3-216ENST00000573936 WDR27A2RRH5 827 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 GABRDO14764 452 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 PMM2O15305 246 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 P4HA2O15460 535 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 ZMYND10O75800 440 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 HNRNPA1P09651 372 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHD3-216ENST00000573936 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 WARSP23381 471 aaKnown RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 HOXA9P31269 272 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 MTHFRP42898 656 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 RBM10P98175 930 aaKnown RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 GPR17Q13304 367 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 WDR44Q5JSH3 913 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 RARS2Q5T160 578 aaKnown RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 SCARA3Q6AZY7 606 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 LIMS2Q7Z4I7 341 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 FBXL13Q8NEE6 735 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 ENOX1Q8TC92 643 aaKnown RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 C2orf15Q8WU43 125 aaKnown RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 SLC35C1Q96A29 364 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 RIPOR3Q96MK2 946 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 NECTIN4Q96NY8 510 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 RHOBTB2Q9BYZ6 727 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 ZCWPW1Q9H0M4 648 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 XYLT2Q9H1B5 865 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 S1PR5Q9H228 398 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 SNX25Q9H3E2 840 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 RAB20Q9NX57 234 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 DDX43Q9NXZ2 648 aaKnown RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 HSFX1Q9UBD0 423 aa11.81□□□□□ -0.52
CHD3-216ENST00000573936 NXF1Q9UBU9 619 aaKnown RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 USP15Q9Y4E8 981 aaPredicted RBP11.81□□□□□ -0.52
CHD3-216ENST00000573936 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHD3-216ENST00000573936 CCDC195A0A1B0GUA6 201 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 XYLBO75191 536 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 PAPLNO95428 1278 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 ASS1P00966 412 aaKnown RBP11.8□□□□□ -0.52
CHD3-216ENST00000573936 SPATA31D3P0C874 917 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
CHD3-216ENST00000573936 GNL1P36915 607 aaPredicted RBP11.8□□□□□ -0.52
CHD3-216ENST00000573936 ZXDAP98168 799 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 ADCY1Q08828 1119 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 PPM1LQ5SGD2 360 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 ATAT1Q5SQI0 421 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 IER5LQ5T953 404 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 RNF19BQ6ZMZ0 732 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 SPATA31D4Q6ZUB0 917 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 CREBRFQ8IUR6 639 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 TRIM59Q8IWR1 403 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 TCEAL8Q8IYN2 117 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 FBXL6Q8N531 539 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 OR6B3Q8NGW1 331 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 TAS1R2Q8TE23 839 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 CNOT6LQ96LI5 555 aaKnown RBP11.8□□□□□ -0.52
CHD3-216ENST00000573936 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 DNAI2Q9GZS0 605 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 NAT10Q9H0A0 1025 aaKnown RBP11.8□□□□□ -0.52
CHD3-216ENST00000573936 CYP4F11Q9HBI6 524 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 CDH9Q9ULB4 789 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 COQ4Q9Y3A0 265 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 MYO15AQ9UKN7 3530 aa11.8□□□□□ -0.52
CHD3-216ENST00000573936 VPS13AQ96RL7 3174 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 PRRG1O14668 218 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 LRG1P02750 347 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 AFPP02771 609 aaKnown RBP11.79□□□□□ -0.52
CHD3-216ENST00000573936 C8AP07357 584 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 POU2F2P09086 479 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 OR4Q2P0C623 313 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 MTIF2P46199 727 aaKnown RBP11.79□□□□□ -0.52
CHD3-216ENST00000573936 FMO5P49326 533 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 TUFMP49411 452 aaKnown RBP11.79□□□□□ -0.52
CHD3-216ENST00000573936 TYRO3Q06418 890 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 KCNH2Q12809 1159 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 PLD1Q13393 1074 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 MAPRE1Q15691 268 aaKnown RBP11.79□□□□□ -0.52
CHD3-216ENST00000573936 NFE2Q16621 373 aaPredicted RBP11.79□□□□□ -0.52
CHD3-216ENST00000573936 CBWD6Q4V339 395 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 SLC39A12Q504Y0 691 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 INTS6LQ5JSJ4 861 aaKnown RBP11.79□□□□□ -0.52
CHD3-216ENST00000573936 CBWD3Q5JTY5 395 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 CBWD5Q5RIA9 395 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 GPR149Q86SP6 731 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 TTC39CQ8N584 583 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 C12orf76Q8N812 135 aaPredicted RBP11.79□□□□□ -0.52
CHD3-216ENST00000573936 PRSS33Q8NF86 280 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 OR10T2Q8NGX3 314 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 SLC7A14Q8TBB6 771 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 SPPL2BQ8TCT7 592 aa11.79□□□□□ -0.52
CHD3-216ENST00000573936 KBTBD7Q8WVZ9 684 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms