RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 NEK11Q8NG66 645 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 MAFAQ8NHW3 353 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 CYP3A43Q9HB55 503 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 SIX2Q9NPC8 291 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 FAM207AQ9NSI2 230 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 SIK3Q9Y2K2 1263 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 ADCY5O95622 1261 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 WARSP23381 471 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 ELF1P32519 619 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 GNL1P36915 607 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 ZNF75DP51815 510 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 RAB33AQ14088 237 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 SLC8B1Q6J4K2 584 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 LLGL2Q6P1M3 1020 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 DCP1BQ8IZD4 617 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 TTC39CQ8N584 583 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 OR6B3Q8NGW1 331 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 CASP10Q92851 521 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 ACBD6Q9BR61 282 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 SMYD3Q9H7B4 428 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 DDX43Q9NXZ2 648 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 CLDND1Q9NY35 253 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 APEX2Q9UBZ4 518 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 DNAJC12Q9UKB3 198 aa13.78□□□□□ -0.2
NPLOC4-214ENST00000573876 A8MXQ7 604 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 TBC1D4O60343 1298 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 NOL4O94818 638 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 CD58P19256 250 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 TBXAS1P24557 533 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 PBX1P40424 430 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 ASPAP45381 313 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 RAP1GAPP47736 663 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 MRE11P49959 708 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 CLCN4P51793 760 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 MFAP3P55082 362 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 POLR2FP61218 127 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 ROR1Q01973 937 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 SMARCB1Q12824 385 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 CUL2Q13617 745 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 ARHGAP44Q17R89 818 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 LIN9Q5TKA1 542 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 TPGS2Q68CL5 300 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 LIMS2Q7Z4I7 341 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 CPLX3Q8WVH0 158 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 KAT5Q92993 513 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 PABPC5Q96DU9 382 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 MRPL45Q9BRJ2 306 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 SDCBP2Q9H190 292 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 PLEKHA4Q9H4M7 779 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 DZANK1Q9NVP4 752 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 CDH9Q9ULB4 789 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 HCFC2Q9Y5Z7 792 aa13.77□□□□□ -0.21
NPLOC4-214ENST00000573876 GABRDO14764 452 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 ADAM12O43184 909 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 TGM5O43548 720 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 PDGFRBP09619 1106 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 UCHL3P15374 230 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 EPCAMP16422 314 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 GTF2F1P35269 517 aaKnown RBP eCLIP13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 GCNT1Q02742 428 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 ADAM15Q13444 863 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 MAPRE1Q15691 268 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 NFE2Q16621 373 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 IQCEQ6IPM2 695 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 RSPO2Q6UXX9 243 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 CCDC149Q6ZUS6 474 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 OSTM1Q86WC4 334 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 VSTM4Q8IW00 320 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 DRC7Q8IY82 874 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 KREMEN2Q8NCW0 462 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 SLC22A17Q8WUG5 538 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 KBTBD7Q8WVZ9 684 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 KREMEN1Q96MU8 473 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 ARID3AQ99856 593 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 SYT15Q9BQS2 421 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 BCO2Q9BYV7 579 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 FAM124BQ9H5Z6 455 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 NLRC4Q9NPP4 1024 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 AFF4Q9UHB7 1163 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 MAFFQ9ULX9 164 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 COG5Q9UP83 839 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 ATG2AQ2TAZ0 1938 aa13.76□□□□□ -0.21
NPLOC4-214ENST00000573876 WDR27A2RRH5 827 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 EPHB6O15197 1021 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 ACAT1P24752 427 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 LMO2P25791 158 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 GPR17Q13304 367 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 RAPGEF1Q13905 1077 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 SLC39A12Q504Y0 691 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 SPECC1LQ69YQ0 1117 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 LILRA6Q6PI73 481 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 ENOSF1Q7L5Y1 443 aa13.75□□□□□ -0.21
NPLOC4-214ENST00000573876 CACNA2D4Q7Z3S7 1137 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms