RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CHURC1-FNTBB4DL54 471 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 HAPLN1P10915 354 aaPredicted RBP23.74■■□□□ 1.39
SNF8-216ENST00000573795 FNTBP49356 437 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 POU5F1Q01860 360 aaKnown RBP23.74■■□□□ 1.39
SNF8-216ENST00000573795 LMNB2Q03252 620 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 KCNA1Q09470 495 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 CCINQ13939 588 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 ARHGAP15Q53QZ3 475 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 DYMQ7RTS9 669 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 TMEM150AQ86TG1 271 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 ZSWIM2Q8NEG5 633 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 FAM200AQ8TCP9 573 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 BPIFB1Q8TDL5 484 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 GIPC2Q8TF65 315 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 SLC46A2Q9BY10 475 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 TMLHEQ9NVH6 421 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 CLIC4Q9Y696 253 aa23.74■■□□□ 1.39
SNF8-216ENST00000573795 DPYSL4O14531 572 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 HRO43593 1189 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 CDC25CP30307 473 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 SRSF5Q13243 272 aaKnown RBP23.73■■□□□ 1.39
SNF8-216ENST00000573795 VEPH1Q14D04 833 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 PON2Q15165 354 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 SCARA3Q6AZY7 606 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 LAIR1Q6GTX8 287 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 METTL23Q86XA0 190 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 KRI1Q8N9T8 703 aaKnown RBP23.73■■□□□ 1.39
SNF8-216ENST00000573795 SPPL2BQ8TCT7 592 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 C2orf15Q8WU43 125 aaKnown RBP23.73■■□□□ 1.39
SNF8-216ENST00000573795 HVCN1Q96D96 273 aa23.73■■□□□ 1.39
SNF8-216ENST00000573795 FBXO2Q9UK22 296 aaPredicted RBP23.73■■□□□ 1.39
SNF8-216ENST00000573795 MYMKA6NI61 221 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 PRR5-ARHGAP8B1AHC4 643 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 HMGA1P17096 107 aaKnown RBP23.72■■□□□ 1.39
SNF8-216ENST00000573795 ARHGAP8P85298 464 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 SPEM2Q0P670 501 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 DGKKQ5KSL6 1271 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 THEM5Q8N1Q8 247 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 POMGNT1Q8WZA1 660 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 DNAJC19Q96DA6 116 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 CHFRQ96EP1 664 aa23.72■■□□□ 1.39
SNF8-216ENST00000573795 ABI2Q9NYB9 513 aaPredicted RBP23.72■■□□□ 1.39
SNF8-216ENST00000573795 ZNF638Q14966 1978 aaKnown RBP23.72■■□□□ 1.39
SNF8-216ENST00000573795 KPNA7A9QM74 516 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 GPR15P49685 360 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 PLCB2Q00722 1185 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 SMARCB1Q12824 385 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 SV2CQ496J9 727 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 PRR23BQ6ZRT6 265 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 STKLD1Q8NE28 680 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 CXorf38Q8TB03 319 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 RIN3Q8TB24 985 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 FAM84AQ96KN4 292 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 STK17AQ9UEE5 414 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 RAB23Q9ULC3 237 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 CCL26Q9Y258 94 aa23.71■■□□□ 1.39
SNF8-216ENST00000573795 IL18RAPO95256 599 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 F11P03951 625 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 RETP07949 1114 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 SDHBP21912 280 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 CASP5P51878 434 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 CUL4AQ13619 759 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 PKN3Q6P5Z2 889 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 LONP2Q86WA8 852 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 NT5DC4Q86YG4 428 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 BRSK2Q8IWQ3 736 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 CMTM8Q8IZV2 173 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 CLIC6Q96NY7 704 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 GCNAQ96QF7 691 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 FAM83CQ9BQN1 747 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 FGFBP2Q9BYJ0 223 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 HPS4Q9NQG7 708 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 TBC1D7Q9P0N9 293 aa23.7■■□□□ 1.38
SNF8-216ENST00000573795 CDV3Q9UKY7 258 aaKnown RBP23.7■■□□□ 1.38
SNF8-216ENST00000573795 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.7■■□□□ 1.38
SNF8-216ENST00000573795 RALGAPA1Q6GYQ0 2036 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 VPS37CA5D8V6 355 aaPredicted RBP23.69■■□□□ 1.38
SNF8-216ENST00000573795 NLRP12P59046 1061 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 SIM2Q14190 667 aaPredicted RBP23.69■■□□□ 1.38
SNF8-216ENST00000573795 POSTNQ15063 836 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 ITPRIPL2Q3MIP1 535 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 L1TD1Q5T7N2 865 aaKnown RBP23.69■■□□□ 1.38
SNF8-216ENST00000573795 HEATR6Q6AI08 1181 aaKnown RBP23.69■■□□□ 1.38
SNF8-216ENST00000573795 DCP1BQ8IZD4 617 aaKnown RBP23.69■■□□□ 1.38
SNF8-216ENST00000573795 PDCL2Q8N4E4 241 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 C1orf127Q8N9H9 656 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 SAAL1Q96ER3 474 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 ZNF560Q96MR9 790 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 FAM213AQ9BRX8 229 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 MRPL44Q9H9J2 332 aaKnown RBP23.69■■□□□ 1.38
SNF8-216ENST00000573795 SEL1LQ9UBV2 794 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 L1RE1Q9UN81 338 aa23.69■■□□□ 1.38
SNF8-216ENST00000573795 SRPRBQ9Y5M8 271 aaKnown RBP23.69■■□□□ 1.38
SNF8-216ENST00000573795 OTOL1A6NHN0 477 aaPredicted RBP23.68■■□□□ 1.38
SNF8-216ENST00000573795 TADA3O75528 432 aa23.68■■□□□ 1.38
SNF8-216ENST00000573795 POLR2BP30876 1174 aaKnown RBP23.68■■□□□ 1.38
SNF8-216ENST00000573795 RESTQ13127 1097 aa23.68■■□□□ 1.38
SNF8-216ENST00000573795 FAM173BQ6P4H8 233 aa23.68■■□□□ 1.38
SNF8-216ENST00000573795 USP13Q92995 863 aaPredicted RBP23.68■■□□□ 1.38
SNF8-216ENST00000573795 PKMYT1Q99640 499 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms