RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 hCG_1818297A0A087WSY0 165 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 NEBLO76041 1014 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 FGFR1P11362 822 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 KCNA2P16389 499 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 ABCD1P33897 745 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 GEMIN4P57678 1058 aaKnown RBP16.48■□□□□ 0.23
NUP88-207ENST00000573584 HIF1AQ16665 826 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 DNAJC24Q6P3W2 148 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 TMEM143Q96AN5 459 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 FAXDC2Q96IV6 333 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 ANKFY1Q9P2R3 1169 aa16.48■□□□□ 0.23
NUP88-207ENST00000573584 MAFGO15525 162 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 SKAP2O75563 359 aaPredicted RBP16.47■□□□□ 0.23
NUP88-207ENST00000573584 ITGAVP06756 1048 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 CALB2P22676 271 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 GPX6P59796 221 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 MAP3K10Q02779 954 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 TAF11Q15544 211 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 TAF1BQ53T94 588 aaPredicted RBP16.47■□□□□ 0.23
NUP88-207ENST00000573584 XRRA1Q6P2D8 792 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 OR5B17Q8NGF7 314 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 NKD2Q969F2 451 aaPredicted RBP16.47■□□□□ 0.23
NUP88-207ENST00000573584 MSTO1Q9BUK6 570 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 PCDH9Q9HC56 1237 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 JPH1Q9HDC5 661 aaPredicted RBP16.47■□□□□ 0.23
NUP88-207ENST00000573584 PGAP2Q9UHJ9 254 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 RIPK3Q9Y572 518 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 CALB1P05937 261 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 EPHB2P29323 1055 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 OGDHQ02218 1023 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 NCOA4Q13772 614 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 RASA2Q15283 850 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 SEPT7Q16181 437 aaKnown RBP16.47■□□□□ 0.23
NUP88-207ENST00000573584 CCDC125Q86Z20 511 aa16.47■□□□□ 0.23
NUP88-207ENST00000573584 K7ERI5 159 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 PEX11AO75192 247 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 ZWINTO95229 277 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 GNAZP19086 355 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 CDKN2BP42772 138 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 EFHC2Q5JST6 749 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 FYB2Q5VWT5 728 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 SCARA3Q6AZY7 606 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 PYROXD1Q8WU10 500 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 NPHS2Q9NP85 383 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 CYLDQ9NQC7 956 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 RNF146Q9NTX7 359 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 KCNG1Q9UIX4 513 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 RABGEF1Q9UJ41 708 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 WDR91A4D1P6 747 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 NDC80O14777 642 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 PIAS1O75925 651 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 GM2AP17900 193 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 SSTR1P30872 391 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 TFDP1Q14186 410 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 EMC2Q15006 297 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 SLC45A4Q5BKX6 768 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 SLFN12LQ6IEE8 588 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 NLRP9Q7RTR0 991 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 STK32AQ8WU08 396 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 NUDCD1Q96RS6 583 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 CGRRF1Q99675 332 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 TARS2Q9BW92 718 aaKnown RBP16.46■□□□□ 0.23
NUP88-207ENST00000573584 CYP39A1Q9NYL5 469 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 SAE1Q9UBE0 346 aaPredicted RBP16.46■□□□□ 0.23
NUP88-207ENST00000573584 SLC9A2Q9UBY0 812 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 ZFP69BQ9UJL9 534 aa16.46■□□□□ 0.23
NUP88-207ENST00000573584 LRRIQ4A6NIV6 560 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 RGS20O76081 388 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 GLRA2P23416 452 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 ADRA1DP25100 572 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 ACTR2P61160 394 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 GAD2Q05329 585 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 EFTUD2Q15029 972 aaKnown RBP eCLIP16.46■□□□□ 0.22
NUP88-207ENST00000573584 MAPK6Q16659 721 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 SEZ6Q53EL9 994 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 MTDHQ86UE4 582 aaKnown RBP16.46■□□□□ 0.22
NUP88-207ENST00000573584 DEPTORQ8TB45 409 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 MICAL1Q8TDZ2 1067 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 NAF1Q96HR8 494 aaKnown RBP16.46■□□□□ 0.22
NUP88-207ENST00000573584 DDX56Q9NY93 547 aaKnown RBP16.46■□□□□ 0.22
NUP88-207ENST00000573584 CLUHO75153 1309 aa16.46■□□□□ 0.22
NUP88-207ENST00000573584 C2CD2LO14523 706 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 LDHAP00338 332 aaKnown RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 PHBP35232 272 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 PTPN7P35236 360 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 DYNLT1P63172 113 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 PIGHQ14442 188 aaPredicted RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 ZNF394Q53GI3 561 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 XKR3Q5GH77 459 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 C3orf62Q6ZUJ4 267 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 PCGF5Q86SE9 256 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 SPDL1Q96EA4 605 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 WNK4Q96J92 1243 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 ANKRD27Q96NW4 1050 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 IMPG2Q9BZV3 1241 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 RPAP3Q9H6T3 665 aaPredicted RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 C10orf88Q9H8K7 445 aa16.45■□□□□ 0.22
NUP88-207ENST00000573584 SSU72Q9NP77 194 aaKnown RBP16.45■□□□□ 0.22
NUP88-207ENST00000573584 FBXO40Q9UH90 709 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms