RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ATXN3LQ9H3M9 355 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 EXOC1Q9NV70 894 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 DDX43Q9NXZ2 648 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 SIX4Q9UIU6 781 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 L1RE1Q9UN81 338 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 ASB3Q9Y575 518 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 NOTCH4Q99466 2003 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 ACTN4O43707 911 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 CLSTN1O94985 981 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 CMA1P23946 247 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 FCARP24071 287 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 GABRR2P28476 465 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 VIPR2P41587 438 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 UBXN2BQ14CS0 331 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 STXBP5Q5T5C0 1151 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 GPIHBP1Q8IV16 184 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 ADGRF2Q8IZF7 708 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 TMEM86AQ8N2M4 240 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 XXYLT1Q8NBI6 393 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 C2orf15Q8WU43 125 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 HPDLQ96IR7 371 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 PI4K2AQ9BTU6 479 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 TRMT61BQ9BVS5 477 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 LRRC3Q9BY71 257 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 GPR88Q9GZN0 384 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 BRD9Q9H8M2 597 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 ZNF334Q9HCZ1 680 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 PCDHB5Q9Y5E4 795 aa13.65□□□□□ -0.22
NPLOC4-213ENST00000573519 TCHHQ07283 1943 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 COL4A3Q01955 1670 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 KANSL1LA0AUZ9 987 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 EXOC3O60645 756 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 PRPF40AO75400 957 aaKnown RBP13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 FGF19O95750 216 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 ATF6P18850 670 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 CD72P21854 359 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 GDI1P31150 447 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 SYKP43405 635 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 NDUFA8P51970 172 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 STARD6P59095 220 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 PRKCQQ04759 706 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 CYP24A1Q07973 514 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 ANGPT1Q15389 498 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 KNOP1Q1ED39 458 aaKnown RBP13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 BMT2Q1RMZ1 405 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 KMT5BQ4FZB7 885 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 ARHGAP15Q53QZ3 475 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 VITQ6UXI7 678 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 TPRG1Q6ZUI0 275 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 TOP6BLQ8N6T0 577 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 FSIP1Q8NA03 581 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 PJA1Q8NG27 643 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 MMS19Q96T76 1030 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 CGRRF1Q99675 332 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 ACBD6Q9BR61 282 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 SCAND2PQ9GZW5 306 aaPredicted RBP13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 HEBP1Q9NRV9 189 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 TMLHEQ9NVH6 421 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 GDAP2Q9NXN4 497 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 SCN1AP35498 2009 aa13.64□□□□□ -0.23
NPLOC4-213ENST00000573519 MUC6Q6W4X9 2439 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 HEPACAM2A8MVW5 462 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 HCRTO43612 131 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 KLRC4O43908 158 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 LRRN2O75325 713 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 PSMC3P17980 439 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 LHX1P48742 406 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 NUCB2P80303 420 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 CYP4F8P98187 520 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 STK4Q13043 487 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 PSMD6Q15008 389 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 NFE2Q16621 373 aaPredicted RBP13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 SOWAHAQ2M3V2 549 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 INTS6LQ5JSJ4 861 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 GPR158Q5T848 1215 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 GAREM2Q75VX8 874 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 TRAPPC11Q7Z392 1133 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 OSTM1Q86WC4 334 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 YAF2Q8IY57 180 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 CGNQ9P2M7 1197 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 GTF3C4Q9UKN8 822 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 MAGED2Q9UNF1 606 aaPredicted RBP13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 HPSEQ9Y251 543 aa13.63□□□□□ -0.23
NPLOC4-213ENST00000573519 FAM170BA6NMN3 283 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 DPYSL4O14531 572 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 ZNF263O14978 683 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 PCSK1P29120 753 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 CDC25CP30307 473 aa13.62□□□□□ -0.23
NPLOC4-213ENST00000573519 GPR15P49685 360 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms