RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 TSPY1Q01534 308 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 KCNJ12Q14500 433 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 TCP11X2Q5H9J9 407 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 INTS6LQ5JSJ4 861 aaKnown RBP18.46■□□□□ 0.55
LITAF-212ENST00000573332 LIN9Q5TKA1 542 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 SPATA31D4Q6ZUB0 917 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 LRRTM3Q86VH5 581 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.46■□□□□ 0.55
LITAF-212ENST00000573332 ELMO3Q96BJ8 720 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 PKMYT1Q99640 499 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 TUBGCP2Q9BSJ2 902 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 SDCBP2Q9H190 292 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 ADAM7Q9H2U9 754 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 SNX25Q9H3E2 840 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 SMYD3Q9H7B4 428 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 FANCLQ9NW38 375 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 TSC2P49815 1807 aa18.46■□□□□ 0.55
LITAF-212ENST00000573332 GTPBP10A4D1E9 387 aaKnown RBP18.45■□□□□ 0.54
LITAF-212ENST00000573332 MTMR11A4FU01 709 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 VNN2O95498 520 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 CAVIN2O95810 425 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 C8AP07357 584 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 LMO2P25791 158 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 ELF1P32519 619 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 ZNF165P49910 485 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 CDH8P55286 799 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 MRPS5P82675 430 aaKnown RBP18.45■□□□□ 0.54
LITAF-212ENST00000573332 TFF2Q03403 129 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 ADCY1Q08828 1119 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 SMAD4Q13485 552 aaKnown RBP18.45■□□□□ 0.54
LITAF-212ENST00000573332 NFE2Q16621 373 aaPredicted RBP18.45■□□□□ 0.54
LITAF-212ENST00000573332 FAM171BQ6P995 826 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 UNC93AQ86WB7 457 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 CREBRFQ8IUR6 639 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 EHBP1Q8NDI1 1231 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 OR6B3Q8NGW1 331 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 SUSD6Q92537 303 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 NME7Q9Y5B8 376 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 REV3LO60673 3130 aa18.45■□□□□ 0.54
LITAF-212ENST00000573332 COL6A3P12111 3177 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 SMTNL1A8MU46 457 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 MBTPS2O43462 519 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 SEC24AO95486 1093 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 ZNF18P17022 549 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 INCA1Q0VD86 236 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 MAPRE1Q15691 268 aaKnown RBP18.44■□□□□ 0.54
LITAF-212ENST00000573332 VWA3BQ502W6 1294 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 SLC39A12Q504Y0 691 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 MIIPQ5JXC2 388 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 GPR149Q86SP6 731 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 TTC39CQ8N584 583 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 C12orf76Q8N812 135 aaPredicted RBP18.44■□□□□ 0.54
LITAF-212ENST00000573332 SLC7A14Q8TBB6 771 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 SPPL2BQ8TCT7 592 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 TATDN2Q93075 761 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 SYT15Q9BQS2 421 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 PRKD2Q9BZL6 878 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 NDST4Q9H3R1 872 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 CYP4F11Q9HBI6 524 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 EYSQ5T1H1 3165 aa18.44■□□□□ 0.54
LITAF-212ENST00000573332 CCDC195A0A1B0GUA6 201 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 GRXCR2A6NFK2 248 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 LRRC10BA6NIK2 292 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 A8MXQ7 604 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 HCRTO43612 131 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 RFPL2O75678 378 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 CLSTN1O94985 981 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 PDGFRBP09619 1106 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 WEE2P0C1S8 567 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 ACAT1P24752 427 aaKnown RBP18.43■□□□□ 0.54
LITAF-212ENST00000573332 HSP90AA4PQ58FG1 418 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 PPM1LQ5SGD2 360 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 RARS2Q5T160 578 aaKnown RBP18.43■□□□□ 0.54
LITAF-212ENST00000573332 CES5AQ6NT32 575 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 SCARA5Q6ZMJ2 495 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.43■□□□□ 0.54
LITAF-212ENST00000573332 CRYBG2Q8N1P7 616 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 AOPEPQ8N6M6 819 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 ATAD1Q8NBU5 361 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 ZNF707Q96C28 371 aaPredicted RBP18.43■□□□□ 0.54
LITAF-212ENST00000573332 FUBP3Q96I24 572 aaKnown RBP eCLIP18.43■□□□□ 0.54
LITAF-212ENST00000573332 ASB2Q96Q27 587 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 HSD3B7Q9H2F3 369 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 ABCB6Q9NP58 842 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 CRTAC1Q9NQ79 661 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 TMLHEQ9NVH6 421 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 GTF3C4Q9UKN8 822 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 FAM50BQ9Y247 325 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 INSL5Q9Y5Q6 135 aa18.43■□□□□ 0.54
LITAF-212ENST00000573332 PLXNA3P51805 1871 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 MYBPHLA2RUH7 354 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 SPDYE4A6NLX3 237 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 PRRG1O14668 218 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 PTPN1P18031 435 aaKnown RBP18.42■□□□□ 0.54
LITAF-212ENST00000573332 TBXAS1P24557 533 aaPredicted RBP18.42■□□□□ 0.54
LITAF-212ENST00000573332 RAP1GAPP47736 663 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 TUFMP49411 452 aaKnown RBP18.42■□□□□ 0.54
LITAF-212ENST00000573332 DUSP4Q13115 394 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 CUL2Q13617 745 aa18.42■□□□□ 0.54
LITAF-212ENST00000573332 IQCB1Q15051 598 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms