RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 CRABP2P29373 138 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PRKCEQ02156 737 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PPARDQ03181 441 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 NFE2L1Q14494 772 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 NFE2Q16621 373 aaPredicted RBP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 KHDC1Q4VXA5 237 aaKnown RBP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 SPDYAQ5MJ70 313 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 FAM47EQ6ZV65 393 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 HEATR4Q86WZ0 1026 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 ZSCAN29Q8IWY8 852 aaPredicted RBP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 CSGALNACT2Q8N6G5 542 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 ALLCQ8N6M5 410 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PNMA1Q8ND90 353 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 BORCS5Q969J3 196 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 COQ7Q99807 217 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 TRIM55Q9BYV6 548 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 RUBCNLQ9H714 662 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 C10orf88Q9H8K7 445 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 NEK6Q9HC98 313 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 RIMKLBQ9ULI2 386 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 FLT1P17948 1338 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PVALEFA0A1B0GWK0 134 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 CCNT1O60563 726 aaKnown RBP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 ZC3H11AO75152 810 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 STAT3P40763 770 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 CETN1Q12798 172 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 SF3A3Q12874 501 aaKnown RBP eCLIP11.03□□□□□ -0.642e-7■■■■■ 49.4
CHRNB1-205ENST00000573209 HNRNPDQ14103 355 aaKnown RBP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 SF3B4Q15427 424 aaKnown RBP eCLIP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 CFAP221Q4G0U5 840 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 IZUMO2Q6UXV1 221 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PEX26Q7Z412 305 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PCGF5Q86SE9 256 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 CROCCP2Q86T23 111 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 VSIG1Q86XK7 387 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 RNF169Q8NCN4 708 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 C7orf57Q8NEG2 295 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 CHPT1Q8WUD6 406 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 C7orf25Q9BPX7 421 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 HERC2P3Q9BVR0 1158 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 NHEJ1Q9H9Q4 299 aaPredicted RBP11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 BARHL2Q9NY43 387 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PCDHA6Q9UN73 950 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 SPEF1Q9Y4P9 236 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 PCDHA8Q9Y5H6 950 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 NHSQ6T4R5 1651 aa11.03□□□□□ -0.64
CHRNB1-205ENST00000573209 MYH11P35749 1972 aa11.02□□□□□ -0.64
CHRNB1-205ENST00000573209 ABCB11O95342 1321 aa11.02□□□□□ -0.64
CHRNB1-205ENST00000573209 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 ESYT3A0FGR9 886 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 GOLGA8JA6NMD2 632 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 ADAMTS3O15072 1205 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 ARHGEF15O94989 841 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 VEGFAP15692 232 aaPredicted RBP11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 RRM1P23921 792 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 HNRNPH3P31942 346 aaKnown RBP11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 HAAOP46952 286 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 KCNQ4P56696 695 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 MED21Q13503 144 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 PDE1CQ14123 709 aaPredicted RBP11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 RWDD4Q6NW29 188 aaKnown RBP11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 ZNF600Q6ZNG1 722 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 SMIM5Q71RC9 77 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 ANKRD53Q8N9V6 530 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 UBLCP1Q8WVY7 318 aaPredicted RBP11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 GPKOWQ92917 476 aaPredicted RBP eCLIP11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 LPIN3Q9BQK8 851 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 FARSBQ9NSD9 589 aaKnown RBP11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 TBX10O75333 385 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 OR52Z1P0C646 297 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 COL6A1P12109 1028 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 EPHB2P29323 1055 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 CLK3P49761 638 aaKnown RBP11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 UBXN2AP68543 259 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 ITPK1Q13572 414 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 ERFEQ4G0M1 354 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 FAM122CQ6P4D5 195 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 KRT25Q7Z3Z0 450 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 SEPT12Q8IYM1 358 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 CENPSQ8N2Z9 138 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 SLAIN1Q8ND83 568 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 PGM2Q96G03 612 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 TRIM9Q9C026 710 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 TMEM60Q9H2L4 133 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 SIAEQ9HAT2 523 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 ZDHHC7Q9NXF8 308 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 MAD2L2Q9UI95 211 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 SLC45A1Q9Y2W3 748 aa11.02□□□□□ -0.65
CHRNB1-205ENST00000573209 GOLGA8QA0A0J9YX86 632 aa11.01□□□□□ -0.65
CHRNB1-205ENST00000573209 GOLGA8OA6NCC3 632 aa11.01□□□□□ -0.65
CHRNB1-205ENST00000573209 GOLGA8NF8WBI6 632 aa11.01□□□□□ -0.65
CHRNB1-205ENST00000573209 GOLGA8RI6L899 631 aa11.01□□□□□ -0.65
CHRNB1-205ENST00000573209 KRT36O76013 467 aa11.01□□□□□ -0.65
CHRNB1-205ENST00000573209 CYP2D6P10635 497 aa11.01□□□□□ -0.65
CHRNB1-205ENST00000573209 PLCG1P19174 1290 aa11.01□□□□□ -0.65
CHRNB1-205ENST00000573209 TBXAS1P24557 533 aaPredicted RBP11.01□□□□□ -0.65
CHRNB1-205ENST00000573209 HIBADHP31937 336 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms