RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ADAM12O43184 909 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 NCK2O43639 380 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 TBC1D4O60343 1298 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 OR4Q2P0C623 313 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 LMO2P25791 158 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 NDST1P52848 882 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 MFAP3P55082 362 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 KCNMA1Q12791 1236 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 HYAL1Q12794 435 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 RAB33AQ14088 237 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 SYCP1Q15431 976 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 INTS6LQ5JSJ4 861 aaKnown RBP15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 ENOSF1Q7L5Y1 443 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 APTXQ7Z2E3 356 aaKnown RBP15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 UNC93AQ86WB7 457 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 ARHGEF19Q8IW93 802 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 OR10T2Q8NGX3 314 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 TNIP3Q96KP6 325 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 TMEM209Q96SK2 561 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 RTP3Q9BQQ7 232 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 ZCWPW1Q9H0M4 648 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 RBSNQ9H1K0 784 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 RTN4Q9NQC3 1192 aaKnown RBP15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 CISHQ9NSE2 258 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 APEX2Q9UBZ4 518 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 DPP7Q9UHL4 492 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 BARX2Q9UMQ3 279 aaPredicted RBP15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 PCDHB4Q9Y5E5 795 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 CHD7Q9P2D1 2997 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 PTPRDP23468 1912 aa15.49■□□□□ 0.07
NPLOC4-209ENST00000572760 A0A1B0GTH6 734 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 WDR27A2RRH5 827 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 CBFA2T2O43439 604 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 TGM5O43548 720 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 HCRTO43612 131 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 SPATA31D3P0C874 917 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 GTF2F1P35269 517 aaKnown RBP eCLIP15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 PSMC1P62191 440 aaKnown RBP15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 GCNT1Q02742 428 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 GPR17Q13304 367 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 MAPRE1Q15691 268 aaKnown RBP15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 NFE2Q16621 373 aaPredicted RBP15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 ARHGAP44Q17R89 818 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 SLC39A12Q504Y0 691 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 ZNF394Q53GI3 561 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 TPGS2Q68CL5 300 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 PHLDB3Q6NSJ2 640 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 SPATA31D4Q6ZUB0 917 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 GAS2L3Q86XJ1 694 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 EFHBQ8N7U6 833 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 NEK11Q8NG66 645 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 ZNF461Q8TAF7 563 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 CASP10Q92851 521 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 PGLYRP2Q96PD5 576 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 ARID3AQ99856 593 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 NT5C1AQ9BXI3 368 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 FAM124BQ9H5Z6 455 aaPredicted RBP15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 CLDND1Q9NY35 253 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 IFNKQ9P0W0 207 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 DNAJC12Q9UKB3 198 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 HCFC2Q9Y5Z7 792 aa15.48■□□□□ 0.07
NPLOC4-209ENST00000572760 PRRG1O14668 218 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 TEX33O43247 280 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 EPCAMP16422 314 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 PTPN1P18031 435 aaKnown RBP15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 USP8P40818 1118 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 CLCN4P51793 760 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 ADCY1Q08828 1119 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 INCA1Q0VD86 236 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 SMARCB1Q12824 385 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 LIN9Q5TKA1 542 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 GJB7Q6PEY0 223 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 RNF19BQ6ZMZ0 732 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 C4orf50Q6ZRC1 276 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 ACOT1Q86TX2 421 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 KREMEN2Q8NCW0 462 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 SLC22A17Q8WUG5 538 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 KAT5Q92993 513 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 NAP1L5Q96NT1 182 aaPredicted RBP15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 ERGIC2Q96RQ1 377 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 CYP4F11Q9HBI6 524 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 FAM207AQ9NSI2 230 aaPredicted RBP15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 AFF4Q9UHB7 1163 aaKnown RBP15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 GTF3C4Q9UKN8 822 aa15.47■□□□□ 0.07
NPLOC4-209ENST00000572760 DOCK6Q96HP0 2047 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 MYBPHLA2RUH7 354 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 ATP2C2O75185 946 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 CILPO75339 1184 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 C1RP00736 705 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 KRT5P13647 590 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 RFX1P22670 979 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 KLK7P49862 253 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 CDR1P51861 262 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 CYP27A1Q02318 531 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 APBA1Q02410 837 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 ORC1Q13415 861 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 RAPGEF1Q13905 1077 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 NR1I3Q14994 352 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 MDH1BQ5I0G3 518 aa15.46■□□□□ 0.07
NPLOC4-209ENST00000572760 KLHDC7AQ5VTJ3 777 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms