RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 SLC14A1Q13336 389 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 KRT32Q14532 448 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 NTRK3Q16288 839 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 XKR4Q5GH76 650 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 CENPPQ6IPU0 288 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 POTEDQ86YR6 584 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 OLIG1Q8TAK6 271 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 PIGOQ8TEQ8 1089 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 EZH1Q92800 747 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-208ENST00000572270 BRF1Q92994 677 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 FNBP1Q96RU3 617 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 ESYT1Q9BSJ8 1104 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 SLC46A2Q9BY10 475 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 ECT2Q9H8V3 914 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 TDP1Q9NUW8 608 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 DNAAF2Q9NVR5 837 aaKnown RBP14.24□□□□□ -0.13
CCDC40-208ENST00000572270 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCDC40-208ENST00000572270 MMP17Q9ULZ9 603 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 CCL26Q9Y258 94 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 CITO14578 2027 aa14.24□□□□□ -0.13
CCDC40-208ENST00000572270 MTMR11A4FU01 709 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 ARHGAP33O14559 1287 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 CAPN9O14815 690 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 AP5Z1O43299 807 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 SOAT2O75908 522 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 OAZ2O95190 189 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 NAMPTP43490 491 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 PPP2R5AQ15172 486 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 CRY1Q16526 586 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 ADCK5Q3MIX3 580 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 C2orf27AQ580R0 203 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 ALKAL1Q6UXT8 129 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 Q6ZUG5 572 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 TOGARAM2Q6ZUX3 1019 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 LURAP1LQ8IV03 231 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 NAXDQ8IW45 347 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 MAB21L3Q8N8X9 362 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 CEP120Q8N960 986 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 ATAD1Q8NBU5 361 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 SPRYD3Q8NCJ5 442 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 LSM14AQ8ND56 463 aaKnown RBP14.23□□□□□ -0.13
CCDC40-208ENST00000572270 USP33Q8TEY7 942 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 ATP2A3Q93084 1043 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 C18orf25Q96B23 403 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-208ENST00000572270 ZMAT2Q96NC0 199 aaKnown RBP14.23□□□□□ -0.13
CCDC40-208ENST00000572270 DCBLD2Q96PD2 775 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 NACC1Q96RE7 527 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 LPIN3Q9BQK8 851 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 POLMQ9NP87 494 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-208ENST00000572270 ASXL3Q9C0F0 2248 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 PCDH15Q96QU1 1955 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 PLXND1Q9Y4D7 1925 aa14.23□□□□□ -0.13
CCDC40-208ENST00000572270 CEP192Q8TEP8 1941 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 KCNE1P15382 129 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 DDX6P26196 483 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC40-208ENST00000572270 EFNA5P52803 228 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 CYP4F3Q08477 520 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 SSRP1Q08945 709 aaKnown RBP14.22□□□□□ -0.13
CCDC40-208ENST00000572270 NR1H3Q13133 447 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 MYBPC2Q14324 1141 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 ZNF568Q3ZCX4 644 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 ARMCX5Q6P1M9 558 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 ZNF843Q8N446 348 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 CCDC33Q8N5R6 958 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 TTC9BQ8N6N2 239 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 OR2I1PQ8NGU4 316 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 PIP4K2CQ8TBX8 421 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 USP13Q92995 863 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-208ENST00000572270 ACAP3Q96P50 834 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 SEPT5Q99719 369 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-208ENST00000572270 HSD17B14Q9BPX1 270 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 CAPN10Q9HC96 672 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 HSFX1Q9UBD0 423 aa14.22□□□□□ -0.13
CCDC40-208ENST00000572270 TIMM13Q9Y5L4 95 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-208ENST00000572270 DENND4CQ5VZ89 1909 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 M0QZQ0 153 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 XRCC6P12956 609 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCDC40-208ENST00000572270 IFNAR2P48551 515 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 TUFMP49411 452 aaKnown RBP14.21□□□□□ -0.13
CCDC40-208ENST00000572270 MTF1Q14872 753 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 MGAT5BQ3V5L5 792 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 NT5DC1Q5TFE4 455 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 FAM177A1Q8N128 213 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-208ENST00000572270 BSNDQ8WZ55 320 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 IFT74Q96LB3 600 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 IL21Q9HBE4 155 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 DUS2Q9NX74 493 aaKnown RBP14.21□□□□□ -0.13
CCDC40-208ENST00000572270 CNTN3Q9P232 1028 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 TNFSF13BQ9Y275 285 aa14.21□□□□□ -0.13
CCDC40-208ENST00000572270 A0A087WWV3 80 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 CAPN8A6NHC0 703 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 ARHGAP6O43182 974 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 DEXIO95424 95 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 HSPA4P34932 840 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 RPL6Q02878 288 aaKnown RBP14.2□□□□□ -0.14
CCDC40-208ENST00000572270 NBR1Q14596 966 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 TSGA10IPQ3SY00 556 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 TMPRSS7Q7RTY8 843 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 PGBD3Q8N328 593 aa14.2□□□□□ -0.14
CCDC40-208ENST00000572270 FRMD1Q8N878 549 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms