RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 RTN2O75298 545 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 OAZ2O95190 189 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 TUBB4AP04350 444 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 PLEKP08567 350 aaPredicted RBP12.68□□□□□ -0.38
CDRT1-206ENST00000571263 FAM228BP0C875 321 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 PNMA6AP0CW24 399 aaPredicted RBP12.68□□□□□ -0.38
CDRT1-206ENST00000571263 BRCC3P46736 316 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 RAP1GAPP47736 663 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 GATMP50440 423 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 EPHB4P54760 987 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 SLC8A3P57103 927 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 KRT17Q04695 432 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 SMARCB1Q12824 385 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 PAN2Q504Q3 1202 aaKnown RBP12.68□□□□□ -0.38
CDRT1-206ENST00000571263 ZNF394Q53GI3 561 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 CCDC122Q5T0U0 273 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 WSCD1Q658N2 575 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 OVOS1Q6IE37 1185 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 FUT10Q6P4F1 479 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 LCLAT1Q6UWP7 414 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 TMEM35BQ8NCS4 154 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 MSANTD4Q8NCY6 345 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
CDRT1-206ENST00000571263 TRIM11Q96F44 468 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 TMEM169Q96HH4 297 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 VCPIP1Q96JH7 1222 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 NOX5Q96PH1 765 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 TSGA10Q9BZW7 698 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 ELOVL4Q9GZR5 314 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 SPG21Q9NZD8 308 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 HESX1Q9UBX0 185 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 PRG3Q9Y2Y8 225 aaPredicted RBP12.68□□□□□ -0.38
CDRT1-206ENST00000571263 CENPFP49454 3210 aa12.68□□□□□ -0.38
CDRT1-206ENST00000571263 ANKRD62A6NC57 917 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 OR6C75A6NL08 312 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 DDX3XO00571 662 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDRT1-206ENST00000571263 KRT86O43790 486 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 TLL1O43897 1013 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 H2AFZP0C0S5 128 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 SETSIPP0DME0 302 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 CHRNB2P17787 502 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 PTPN1P18031 435 aaKnown RBP12.67□□□□□ -0.38
CDRT1-206ENST00000571263 FGFR3P22607 806 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 VAV2P52735 878 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 TSPY1Q01534 308 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 FMO1Q01740 532 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-206ENST00000571263 KIF5AQ12840 1032 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 USP41Q3LFD5 358 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 FAM117BQ6P1L5 589 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 ANKS3Q6ZW76 656 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 H2AFVQ71UI9 128 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 KIAA1328Q86T90 577 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 GLYCTKQ8IVS8 523 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 DCP1BQ8IZD4 617 aaKnown RBP12.67□□□□□ -0.38
CDRT1-206ENST00000571263 B3GALNT2Q8NCR0 500 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 UBE2Q2Q8WVN8 375 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 CYFIP2Q96F07 1278 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 IGSF21Q96ID5 467 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 SAMD11Q96NU1 681 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 PLVAPQ9BX97 442 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 ISCUQ9H1K1 167 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 SEPT11Q9NVA2 429 aaKnown RBP12.67□□□□□ -0.38
CDRT1-206ENST00000571263 PPP2R2CQ9Y2T4 447 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 PCDHA13Q9Y5I0 950 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 FNDC1Q4ZHG4 1894 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-206ENST00000571263 COL4A6Q14031 1691 aa12.67□□□□□ -0.38
CDRT1-206ENST00000571263 B4GALT3O60512 393 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 CYP1A1P04798 512 aaPredicted RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 MMEP08473 750 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 PDGFRBP09619 1106 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 MYBL1P10243 752 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 UNGP13051 313 aaPredicted RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 CDH5P33151 784 aaPredicted RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 MAGEA10P43363 369 aaPredicted RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 CREMQ03060 361 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 CLEC16AQ2KHT3 1053 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 FAM171A1Q5VUB5 890 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 TAF3Q5VWG9 929 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 ZNF280DQ6N043 979 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 C4orf50Q6ZRC1 276 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 DDX53Q86TM3 631 aaKnown RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 CCAR2Q8N163 923 aaKnown RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 SLC39A11Q8N1S5 342 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 COLGALT1Q8NBJ5 622 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 CLP1Q92989 425 aaKnown RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 TWNKQ96RR1 684 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 HNRNPABQ99729 332 aaKnown RBP12.66□□□□□ -0.38
CDRT1-206ENST00000571263 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 TTPALQ9BTX7 342 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 SPTLC3Q9NUV7 552 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 MARCH5Q9NX47 278 aa12.66□□□□□ -0.38
CDRT1-206ENST00000571263 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms