RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 FAM86B1E9PN63 330 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 I3L4J1 428 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 CILPO75339 1184 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 PRKCBP05771 671 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 FAM86B2P0C5J1 330 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 FGFR3P22607 806 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 COL8A1P27658 744 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 ACTN2P35609 894 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 MARSP56192 900 aaKnown RBP7.65□□□□□ -1.18
CHD3-213ENST00000571249 ELAVL2Q12926 359 aaKnown RBP7.65□□□□□ -1.18
CHD3-213ENST00000571249 UGCGQ16739 394 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 LINC00303Q3SY05 128 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 FBXO43Q4G163 708 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 BROXQ5VW32 411 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 NIPA1Q7RTP0 329 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 TCEAL8Q8IYN2 117 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 TRIML1Q8N9V2 468 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 GIPC2Q8TF65 315 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 SNRNP27Q8WVK2 155 aaKnown RBP7.65□□□□□ -1.18
CHD3-213ENST00000571249 HMGB4Q8WW32 186 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 SREK1Q8WXA9 508 aaKnown RBP7.65□□□□□ -1.18
CHD3-213ENST00000571249 ZDHHC16Q969W1 377 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 EVI5LQ96CN4 794 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 SPZ1Q9BXG8 430 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 NRSN2Q9GZP1 204 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 CXCL16Q9H2A7 254 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 CHMP4BQ9H444 224 aaKnown RBP7.65□□□□□ -1.18
CHD3-213ENST00000571249 GAREM1Q9H706 876 aa7.65□□□□□ -1.18
CHD3-213ENST00000571249 NOVA2Q9UNW9 492 aaKnown RBP7.65□□□□□ -1.18
CHD3-213ENST00000571249 MED13Q9UHV7 2174 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 TDRD15B5MCY1 1934 aaKnown RBP7.64□□□□□ -1.19
CHD3-213ENST00000571249 CEP192Q8TEP8 1941 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 hCG_1642624A0A1W2PR95 340 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 SOWAHDA6NJG2 315 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 KLK10O43240 276 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 AP5Z1O43299 807 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 TNFSF14O43557 240 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 IGHDP01880 384 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 SRGAP2CP0DJJ0 459 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 TKTP29401 623 aaKnown RBP7.64□□□□□ -1.19
CHD3-213ENST00000571249 GJA4P35212 333 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 BNC1Q01954 994 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 TUSC3Q13454 348 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 HDAC1Q13547 482 aaPredicted RBP7.64□□□□□ -1.19
CHD3-213ENST00000571249 NFXL1Q6ZNB6 911 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 SRGAP1Q7Z6B7 1085 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 SFTPA1Q8IWL2 248 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 RGL4Q8IZJ4 473 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 RDH13Q8NBN7 331 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 LEMD2Q8NC56 503 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 ZNF248Q8NDW4 579 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 CPB2Q96IY4 423 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 CEP89Q96ST8 783 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 ANO3Q9BYT9 981 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 NXF3Q9H4D5 531 aaKnown RBP7.64□□□□□ -1.19
CHD3-213ENST00000571249 DCTPP1Q9H773 170 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 CNNM2Q9H8M5 875 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 ZDHHC4Q9NPG8 344 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 BCCIPQ9P287 314 aaKnown RBP eCLIP7.64□□□□□ -1.19
CHD3-213ENST00000571249 PARP2Q9UGN5 583 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 TBX20Q9UMR3 447 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 CSMD2Q7Z408 3487 aa7.64□□□□□ -1.19
CHD3-213ENST00000571249 SVILO95425 2214 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 MYH9P35579 1960 aaKnown RBP7.63□□□□□ -1.19
CHD3-213ENST00000571249 IGLV3-22A0A075B6J6 115 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 WDR64B1ANS9 1081 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 K7EQS6 105 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 SGK1O00141 431 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 CBX4O00257 560 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 IFIT3O14879 490 aaKnown RBP7.63□□□□□ -1.19
CHD3-213ENST00000571249 ERLIN2O94905 339 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 ATF2P15336 505 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 MX1P20591 662 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 MCM2P49736 904 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 FOSBP53539 338 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 UCNP55089 124 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 SCRN1Q12765 414 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 IMMTQ16891 758 aaKnown RBP7.63□□□□□ -1.19
CHD3-213ENST00000571249 HLA-BQ31612 363 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 GPR158Q5T848 1215 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 CD300LGQ6UXG3 332 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 ANKS3Q6ZW76 656 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 GAREM2Q75VX8 874 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 RABEPKQ7Z6M1 372 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 CATIPQ7Z7H3 387 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 HACE1Q8IYU2 909 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 PGBD3Q8N328 593 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 SRBD1Q8N5C6 995 aaKnown RBP7.63□□□□□ -1.19
CHD3-213ENST00000571249 RIN3Q8TB24 985 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 LRRN4Q8WUT4 740 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 CD101Q93033 1021 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 HIC2Q96JB3 615 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 HSPA12BQ96MM6 686 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 NIFKQ9BYG3 293 aaKnown RBP7.63□□□□□ -1.19
CHD3-213ENST00000571249 BACH2Q9BYV9 841 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 TRIM6Q9C030 488 aaPredicted RBP7.63□□□□□ -1.19
CHD3-213ENST00000571249 RWDD1Q9H446 243 aaPredicted RBP7.63□□□□□ -1.19
CHD3-213ENST00000571249 DISC1Q9NRI5 854 aa7.63□□□□□ -1.19
CHD3-213ENST00000571249 THG1LQ9NWX6 298 aaKnown RBP7.63□□□□□ -1.19
CHD3-213ENST00000571249 OBP2AQ9NY56 170 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms