RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 BANPQ8N9N5 519 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 ATP11CQ8NB49 1132 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 TUBGCP5Q96RT8 1024 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 DDX50Q9BQ39 737 aaKnown RBP16.21■□□□□ 0.19
SMG6-207ENST00000570756 WDR18Q9BV38 432 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 PHACTR1Q9C0D0 580 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 TMCO1Q9UM00 188 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 POLIQ9UNA4 740 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 COQ4Q9Y3A0 265 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 FCHO1O14526 889 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 DLDP09622 509 aaKnown RBP16.21■□□□□ 0.19
SMG6-207ENST00000570756 AMPD1P23109 780 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 RTP1P59025 263 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 HIF1AQ16665 826 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 MARK2Q7KZI7 788 aaKnown RBP16.21■□□□□ 0.19
SMG6-207ENST00000570756 LCA5Q86VQ0 697 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 LRRC6Q86X45 466 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 ZNF677Q86XU0 584 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 LXNQ9BS40 222 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 KCNK13Q9HB14 408 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 TMEM8AQ9HCN3 771 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 MRPL47Q9HD33 250 aaKnown RBP16.21■□□□□ 0.19
SMG6-207ENST00000570756 RABGEF1Q9UJ41 708 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 DNPEPQ9ULA0 475 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 PHF24Q9UPV7 400 aa16.21■□□□□ 0.19
SMG6-207ENST00000570756 IL1BP01584 269 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 CD58P19256 250 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 SNAP25P60880 206 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 NFX1Q12986 1120 aaKnown RBP16.2■□□□□ 0.18
SMG6-207ENST00000570756 DLGAP5Q15398 846 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 RNASEH2BQ5TBB1 312 aaKnown RBP16.2■□□□□ 0.18
SMG6-207ENST00000570756 CCDC174Q6PII3 467 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 PADI6Q6TGC4 694 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 PCGF5Q86SE9 256 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 SCUBE1Q8IWY4 988 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 FBXL13Q8NEE6 735 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 PAFAH2Q99487 392 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 ADAM33Q9BZ11 813 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 WRAP73Q9P2S5 460 aaPredicted RBP16.2■□□□□ 0.18
SMG6-207ENST00000570756 B2RBV5 119 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 LSAMPQ13449 338 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 PRKD1Q15139 912 aaPredicted RBP16.2■□□□□ 0.18
SMG6-207ENST00000570756 DNAL1Q4LDG9 190 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 GLIS1Q8NBF1 620 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 PYROXD1Q8WU10 500 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 GPAMQ9HCL2 828 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 SLC17A7Q9P2U7 560 aa16.2■□□□□ 0.18
SMG6-207ENST00000570756 DRG1Q9Y295 367 aaKnown RBP16.2■□□□□ 0.18
SMG6-207ENST00000570756 IPO5O00410 1097 aaKnown RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 LPXNO60711 386 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 ZSCAN5DPP0CG00 497 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 GJC1P36383 396 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 TAS2R40P59535 323 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 MCCD1P59942 119 aaPredicted RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 NOP14P78316 857 aaKnown RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 MAP7Q14244 749 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 SNRNP35Q16560 246 aaKnown RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 PABPC1LQ4VXU2 614 aaKnown RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 SLC30A10Q6XR72 485 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 ACAD11Q709F0 780 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 USP37Q86T82 979 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 MYLK4Q86YV6 388 aaPredicted RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 RCOR2Q8IZ40 523 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 CPA5Q8WXQ8 436 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 DHX38Q92620 1227 aaKnown RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 PRR11Q96HE9 360 aaPredicted RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 DHRS4Q9BTZ2 278 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 ACSS3Q9H6R3 686 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 RAB20Q9NX57 234 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 RGPD3A6NKT7 1758 aaPredicted RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 RGPD4Q7Z3J3 1758 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 H3BRJ5 948 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 TM7SF2O76062 418 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 CYP1A1P04798 512 aaPredicted RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 ADRB2P07550 413 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 MYL2P10916 166 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 ARL4CP56559 192 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 GPX6P59796 221 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 ACTR3P61158 418 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 RIPOR1Q6ZS17 1223 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 ANKMY2Q8IV38 441 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 CCDC127Q96BQ5 260 aa16.19■□□□□ 0.18
SMG6-207ENST00000570756 RBBP6Q7Z6E9 1792 aaKnown RBP16.19■□□□□ 0.18
SMG6-207ENST00000570756 FKBP6O75344 327 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 GLRA2P23416 452 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 BPIFB4P59827 614 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 GCNT1Q02742 428 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 CDC16Q13042 620 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 TFDP1Q14186 410 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 CFAP157Q5JU67 520 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 ZNF577Q9BSK1 485 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 TEKT3Q9BXF9 490 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 NMUR2Q9GZQ4 415 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 UNC45AQ9H3U1 944 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 PCDH9Q9HC56 1237 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 LMCD1Q9NZU5 365 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 USTQ9Y2C2 406 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 TBC1D30Q9Y2I9 924 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 SUGT1Q9Y2Z0 365 aa16.18■□□□□ 0.18
SMG6-207ENST00000570756 PCDHB2Q9Y5E7 798 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms