RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 PCDHA3Q9Y5H8 950 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 GPR25O00155 361 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 TRAPPC3O43617 180 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 FGGP02679 453 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 CDH5P33151 784 aaPredicted RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 SCNN1AP37088 669 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 TNFSF9P41273 254 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 APLP1P51693 650 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 TFDP2Q14188 446 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 SCARA5Q6ZMJ2 495 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 OR6B3Q8NGW1 331 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 STK32AQ8WU08 396 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 FAM193BQ96PV7 902 aaPredicted RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 M0QYV0 167 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 PHF2O75151 1096 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 HEXIM1O94992 359 aaKnown RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 COL6A1P12109 1028 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 UNGP13051 313 aaPredicted RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 CTNNA1P35221 906 aaKnown RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 ZNF132P52740 706 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 BCAT1P54687 386 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 NFX1Q12986 1120 aaKnown RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 RUFY4Q6ZNE9 571 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 BZW1Q7L1Q6 419 aaKnown RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 HOOK3Q86VS8 718 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 CCDC105Q8IYK2 499 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 EXD1Q8NHP7 514 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 KRT12Q99456 494 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 A8MXQ7 604 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 B4GALT5O43286 388 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 ECEL1O95672 775 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 THP07101 528 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 MYZAPP0CAP1 466 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 KRT3P12035 628 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 PRKAR2AP13861 404 aaKnown RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 COMTP21964 271 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 PSMC1P62191 440 aaKnown RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 C2orf54Q08AI8 447 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 SPDYCQ5MJ68 293 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 PRAMEF19Q5SWL8 479 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 PLEKHA7Q6IQ23 1121 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 PDZD4Q76G19 769 aaPredicted RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 POLNQ7Z5Q5 900 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 ARFGAP2Q8N6H7 521 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 MAGOHBQ96A72 148 aaKnown RBP6.38□□□□□ -1.39
CYLD-216ENST00000569891 PPP1R16BQ96T49 567 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 CCDC77Q9BR77 488 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 APOL6Q9BWW8 343 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 EFR3BQ9Y2G0 817 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 SNX9Q9Y5X1 595 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 CDY2AQ9Y6F7 541 aa6.38□□□□□ -1.39
CYLD-216ENST00000569891 RECQL4O94761 1208 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 NFICP08651 508 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 PNMA6AP0CW24 399 aaPredicted RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 ACO1P21399 889 aaKnown RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 MMP8P22894 467 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 GSCP56915 257 aaPredicted RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 DR1Q01658 176 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 INCA1Q0VD86 236 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 SLMAPQ14BN4 828 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 AMHR2Q16671 573 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 NBPF20Q3BBV1 942 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 SLC10A6Q3KNW5 377 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 DSTYKQ6XUX3 929 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 KLHL7Q8IXQ5 586 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 CCDC89Q8N998 374 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 PSMB7Q99436 277 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 ABCB6Q9NP58 842 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 SNTG2Q9NY99 539 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 RRN3Q9NYV6 651 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 FAM155AB1AL88 458 aaPredicted RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 ABLIM1O14639 778 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 SRGAP2O75044 1071 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 CILPO75339 1184 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 GPR32O75388 356 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 FBXO21O94952 628 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 ZFXP17010 805 aaPredicted RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 CHRNB2P17787 502 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 PSMA2P25787 234 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 ZNF135P52742 658 aaPredicted RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 EIF3BP55884 814 aaKnown RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 PTGISQ16647 500 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 EFHC1Q5JVL4 640 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 C4orf22Q6V702 233 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 MMS22LQ6ZRQ5 1243 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 MON1BQ7L1V2 547 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 GPIHBP1Q8IV16 184 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 C1orf127Q8N9H9 656 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 FAM71BQ8TC56 605 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 CYFIP2Q96F07 1278 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.37□□□□□ -1.39
CYLD-216ENST00000569891 NCK2O43639 380 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 ODC1P11926 461 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 ATP5DP30049 168 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 CXCR5P32302 372 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 GNL1P36915 607 aaPredicted RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 BEX3Q00994 111 aa6.37□□□□□ -1.39
CYLD-216ENST00000569891 GABPB1Q06547 395 aaPredicted RBP6.37□□□□□ -1.39
CYLD-216ENST00000569891 CYP4F22Q6NT55 531 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms