RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GARTP22102 1010 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 CASP1P29466 404 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 TXLNAP40222 546 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 RPS9P46781 194 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 CSTF1Q05048 431 aaKnown RBP14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 FCHO2Q0JRZ9 810 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 PLD1Q13393 1074 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 MGAT5BQ3V5L5 792 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 FOXD4L5Q5VV16 416 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 LMBRD2Q68DH5 695 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 ARMCX5Q6P1M9 558 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 OR5B17Q8NGF7 314 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 FOXD4L4Q8WXT5 416 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 IRF7Q92985 503 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 CHRDQ9H2X0 955 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 KBTBD4Q9NVX7 518 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 C2orf42Q9NWW7 574 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 RBAKQ9NYW8 714 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 HSFX1Q9UBD0 423 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 FBXO4Q9UKT5 387 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 DSEQ9UL01 958 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 AGAP1Q9UPQ3 857 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 SLC38A8A6NNN8 435 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 CHRNB1P11230 501 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 PAX3P23760 479 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 ACAT1P24752 427 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 CCNE1P24864 410 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 PKP1Q13835 747 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 POSTNQ15063 836 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 ZNF528Q3MIS6 628 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 GPR158Q5T848 1215 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 SDHAF4Q5VUM1 108 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 EPM2AIP1Q7L775 607 aaPredicted RBP14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 CBWD2Q8IUF1 395 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 ZBTB44Q8NCP5 570 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 TTC8Q8TAM2 541 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 FAM3CQ92520 227 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 CHFRQ96EP1 664 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 SLC46A2Q9BY10 475 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 TRIM9Q9C026 710 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 MTMR12Q9C0I1 747 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 ATXN3LQ9H3M9 355 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 ZSCAN16Q9H4T2 348 aaPredicted RBP14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 RBM12Q9NTZ6 932 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 ABI2Q9NYB9 513 aaPredicted RBP14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 EXOC7Q9UPT5 735 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 ASB3Q9Y575 518 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 NME7Q9Y5B8 376 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 MYO16Q9Y6X6 1858 aa14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 HELZP42694 1942 aaKnown RBP14.92□□□□□ -0.02
GTF3C1-211ENST00000569653 ZNF263O14978 683 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 SPTLC2O15270 562 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 LAMTOR5O43504 91 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 EXTL3O43909 919 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 LILRB5O75023 590 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 TADA3O75528 432 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 HSP90AA1P07900 732 aaKnown RBP14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 TNK2Q07912 1038 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 STK38Q15208 465 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 SV2CQ496J9 727 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 NT5DC4Q86YG4 428 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 KCNG4Q8TDN1 519 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 NELL2Q99435 816 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 GPR88Q9GZN0 384 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 GZF1Q9H116 711 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 SEMA4AQ9H3S1 761 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 GTSE1Q9NYZ3 720 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 CCL26Q9Y258 94 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 PCDHB13Q9Y5F0 798 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 KIAA1549LQ6ZVL6 1849 aa14.91□□□□□ -0.02
GTF3C1-211ENST00000569653 CHADO15335 359 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 TGFB1I1O43294 461 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 F11P03951 625 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 MAGEA9P43362 315 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 EHHADHQ08426 723 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 BFSP1Q12934 665 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 FOXD4L6Q3SYB3 417 aaPredicted RBP14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 FOXD4L3Q6VB84 417 aaPredicted RBP14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 Q6ZS52 159 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 LIMS2Q7Z4I7 341 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 METTL23Q86XA0 190 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 SYCP3Q8IZU3 236 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 SPPL2BQ8TCT7 592 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 KBTBD7Q8WVZ9 684 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 DHX58Q96C10 678 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 ZNF560Q96MR9 790 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 PI4K2AQ9BTU6 479 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 TNMDQ9H2S6 317 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 TASP1Q9H6P5 420 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 LMAN1LQ9HAT1 526 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 EML5Q05BV3 1969 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 SPTBN2O15020 2390 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 NCOR2Q9Y618 2525 aa14.9□□□□□ -0.02
GTF3C1-211ENST00000569653 OTOL1A6NHN0 477 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-211ENST00000569653 TULP1O00294 542 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-211ENST00000569653 MAN2B1O00754 1011 aa14.89□□□□□ -0.03
GTF3C1-211ENST00000569653 GABRDO14764 452 aa14.89□□□□□ -0.03
GTF3C1-211ENST00000569653 PPP6R2O75170 966 aa14.89□□□□□ -0.03
GTF3C1-211ENST00000569653 ATP2C2O75185 946 aa14.89□□□□□ -0.03
GTF3C1-211ENST00000569653 YEATS4O95619 227 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms