RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZNF197O14709 1029 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 CCNE1P24864 410 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 NCAPHQ15003 741 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 PSMD6Q15008 389 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 SCARA3Q6AZY7 606 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 CENPPQ6IPU0 288 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 KLHL10Q6JEL2 608 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 C12orf56Q8IXR9 622 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 PDCL2Q8N4E4 241 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 SLC44A3Q8N4M1 653 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 FBXL6Q8N531 539 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 NELFBQ8WX92 580 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 MCRS1Q96EZ8 462 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 HPDLQ96IR7 371 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 MED15Q96RN5 788 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 ZCWPW1Q9H0M4 648 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 ASAH2Q9NR71 780 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 CEP72Q9P209 647 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 SIX4Q9UIU6 781 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 DUSP12Q9UNI6 340 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 CTNND2Q9UQB3 1225 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 MAPK8IP1Q9UQF2 711 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 NUMBLQ9Y6R0 609 aa15.54■□□□□ 0.08
COMMD4-225ENST00000569245 PDCD11Q14690 1871 aaKnown RBP15.54■□□□□ 0.08
COMMD4-225ENST00000569245 C2orf16Q68DN1 1984 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 MTCL1Q9Y4B5 1905 aaKnown RBP15.53■□□□□ 0.08
COMMD4-225ENST00000569245 BICDL2A1A5D9 508 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 MTMR11A4FU01 709 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 BECN2A8MW95 431 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 ANHXE9PGG2 379 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 NARSO43776 548 aaKnown RBP15.53■□□□□ 0.08
COMMD4-225ENST00000569245 CLSTN1O94985 981 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 MYL4P12829 197 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 TSPY1Q01534 308 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 MYL5Q02045 173 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 HTR4Q13639 388 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 SLC5A9Q2M3M2 681 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 MGAT5BQ3V5L5 792 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 PARM1Q6UWI2 310 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 MTSS1LQ765P7 747 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 TRAPPC11Q7Z392 1133 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 LUZP1Q86V48 1076 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 NPAS3Q8IXF0 933 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 DCP1BQ8IZD4 617 aaKnown RBP15.53■□□□□ 0.08
COMMD4-225ENST00000569245 HS6ST3Q8IZP7 471 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 TMEM86AQ8N2M4 240 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 RNF214Q8ND24 703 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 CXorf38Q8TB03 319 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 CGRRF1Q99675 332 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 SEPT5Q99719 369 aaPredicted RBP15.53■□□□□ 0.08
COMMD4-225ENST00000569245 RTP3Q9BQQ7 232 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 CRISPLD1Q9H336 500 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 AVENQ9NQS1 362 aaPredicted RBP15.53■□□□□ 0.08
COMMD4-225ENST00000569245 L1RE1Q9UN81 338 aa15.53■□□□□ 0.08
COMMD4-225ENST00000569245 CALUO43852 315 aaPredicted RBP15.52■□□□□ 0.08
COMMD4-225ENST00000569245 PHACTR2O75167 634 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 SOAT2O75908 522 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 VNN2O95498 520 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 PDGFBP01127 241 aaPredicted RBP15.52■□□□□ 0.08
COMMD4-225ENST00000569245 NR3C1P04150 777 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 CFHP08603 1231 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 CEBPBP17676 345 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 TUFMP49411 452 aaKnown RBP15.52■□□□□ 0.08
COMMD4-225ENST00000569245 MYL7Q01449 175 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 TRPC3Q13507 836 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 TAF12Q16514 161 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 AOPEPQ8N6M6 819 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 TOP6BLQ8N6T0 577 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 LEMD2Q8NC56 503 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 FGF14Q92915 247 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 TCEAL4Q96EI5 215 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 MMS19Q96T76 1030 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 KCTD10Q9H3F6 313 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 GDAP2Q9NXN4 497 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 DDX43Q9NXZ2 648 aaKnown RBP15.52■□□□□ 0.08
COMMD4-225ENST00000569245 ABI2Q9NYB9 513 aaPredicted RBP15.52■□□□□ 0.08
COMMD4-225ENST00000569245 GDE1Q9NZC3 331 aa15.52■□□□□ 0.08
COMMD4-225ENST00000569245 TECTAO75443 2155 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 DENND4AQ7Z401 1863 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 STK25O00506 426 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 PDXKO00764 312 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 SRFP11831 508 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 RFX1P22670 979 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 ACAT1P24752 427 aaKnown RBP15.51■□□□□ 0.07
COMMD4-225ENST00000569245 CASP4P49662 377 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 STX17P56962 302 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 LRRC63Q05C16 580 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 SMARCB1Q12824 385 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 BIRC3Q13489 604 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 VEPH1Q14D04 833 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 ZCWPW2Q504Y3 356 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 PRSS36Q5K4E3 855 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 CEP135Q66GS9 1140 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 ANKRD40Q6AI12 368 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 TTI2Q6NXR4 508 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 LRRTM3Q86VH5 581 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 ADGRF2Q8IZF7 708 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 SIX5Q8N196 739 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 TTC9BQ8N6N2 239 aa15.51■□□□□ 0.07
COMMD4-225ENST00000569245 C2orf15Q8WU43 125 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms