RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 SLC22A17Q8WUG5 538 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 PPM1EQ8WY54 764 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 JAKMIP2Q96AA8 810 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 PABPC5Q96DU9 382 aaKnown RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 SYT15Q9BQS2 421 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 PLEKHA4Q9H4M7 779 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 AFF4Q9UHB7 1163 aaKnown RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 BARX2Q9UMQ3 279 aaPredicted RBP9.74□□□□□ -0.85
CHD9-219ENST00000569225 HCFC2Q9Y5Z7 792 aa9.74□□□□□ -0.85
CHD9-219ENST00000569225 PRRG1O14668 218 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 ADAM12O43184 909 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 TPM3P06753 285 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 PDGFRBP09619 1106 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 HOXB8P17481 243 aaPredicted RBP9.73□□□□□ -0.85
CHD9-219ENST00000569225 CD58P19256 250 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 RFX1P22670 979 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 PON1P27169 355 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 RAP1GAPP47736 663 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 MFAP3P55082 362 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 CDH8P55286 799 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 UBXN1Q04323 297 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 INCA1Q0VD86 236 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 ADAM15Q13444 863 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 COL19A1Q14993 1142 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 SLC39A12Q504Y0 691 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 TMEM184AQ6ZMB5 413 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 C4orf50Q6ZRC1 276 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 EP400NLQ6ZTU2 488 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 OSTM1Q86WC4 334 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 KREMEN2Q8NCW0 462 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 TATDN2Q93075 761 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 ELMO3Q96BJ8 720 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 PCMTD1Q96MG8 357 aaPredicted RBP9.73□□□□□ -0.85
CHD9-219ENST00000569225 RTP3Q9BQQ7 232 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 NT5C1AQ9BXI3 368 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 CLDND1Q9NY35 253 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 APEX2Q9UBZ4 518 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 DAAM1Q9Y4D1 1078 aa9.73□□□□□ -0.85
CHD9-219ENST00000569225 WDR27A2RRH5 827 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 LRRN2O75325 713 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 ABLIM3O94929 683 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 ATF2P15336 505 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 EPCAMP16422 314 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 SLC9A1P19634 815 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 ACAT1P24752 427 aaKnown RBP9.72□□□□□ -0.85
CHD9-219ENST00000569225 NDST1P52848 882 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 LILRA6Q6PI73 481 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 RNF214Q8ND24 703 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 HLA-CQ95604 372 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 SDCBP2Q9H190 292 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 SFXN1Q9H9B4 322 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 CYP4F11Q9HBI6 524 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 ABCB6Q9NP58 842 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 UBE2TQ9NPD8 197 aaPredicted RBP9.72□□□□□ -0.85
CHD9-219ENST00000569225 MAN1C1Q9NR34 630 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 HSFX1Q9UBD0 423 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 FBXW11Q9UKB1 542 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 COG5Q9UP83 839 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 PCDHB5Q9Y5E4 795 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 TRIP11Q15643 1979 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 ATP8B3O60423 1300 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 PLXNA4Q9HCM2 1894 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 CILPO75339 1184 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 OR4Q2P0C623 313 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 PTPN1P18031 435 aaKnown RBP9.72□□□□□ -0.85
CHD9-219ENST00000569225 LMO2P25791 158 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 GTF2F1P35269 517 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHD9-219ENST00000569225 TUFMP49411 452 aaKnown RBP9.72□□□□□ -0.85
CHD9-219ENST00000569225 FANCCQ00597 558 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 ADCY1Q08828 1119 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 PLD1Q13393 1074 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 KCNC3Q14003 757 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 CTC1Q2NKJ3 1217 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 UVSSAQ2YD98 709 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 RNF19BQ6ZMZ0 732 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 RRAGAQ7L523 313 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 APTXQ7Z2E3 356 aaKnown RBP9.72□□□□□ -0.85
CHD9-219ENST00000569225 SPATA2LQ8IUW3 424 aaPredicted RBP9.72□□□□□ -0.85
CHD9-219ENST00000569225 TCEAL8Q8IYN2 117 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 B3GALNT2Q8NCR0 500 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 MYCBPAPQ8TBZ2 947 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 SPPL2BQ8TCT7 592 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 FUBP3Q96I24 572 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHD9-219ENST00000569225 ARID3AQ99856 593 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 LSM14BQ9BX40 385 aaKnown RBP9.72□□□□□ -0.85
CHD9-219ENST00000569225 PLCB1Q9NQ66 1216 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 ZDHHC7Q9NXF8 308 aa9.72□□□□□ -0.85
CHD9-219ENST00000569225 A0A1B0GTH6 734 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 MTMR11A4FU01 709 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 LINC01565O15544 149 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 CBFA2T2O43439 604 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 C8AP07357 584 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 HNRNPA1P09651 372 aaKnown RBP eCLIP9.71□□□□□ -0.85
CHD9-219ENST00000569225 SPATA31D3P0C874 917 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 PSMC1P62191 440 aaKnown RBP9.71□□□□□ -0.85
CHD9-219ENST00000569225 SYCP1Q15431 976 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 MDH1BQ5I0G3 518 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 PPM1LQ5SGD2 360 aa9.71□□□□□ -0.85
CHD9-219ENST00000569225 PHLDB3Q6NSJ2 640 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms