RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 KRT2P35908 639 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 IFNAR2P48551 515 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 AARSP49588 968 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMG1-216ENST00000569122 MRPS21P82921 87 aaKnown RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 CYP4F8P98187 520 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 DMP1Q13316 513 aaPredicted RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 TRIP6Q15654 476 aaKnown RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 KYAT1Q16773 422 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 MGAT5BQ3V5L5 792 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 TRIM68Q6AZZ1 485 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 MPZL3Q6UWV2 235 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 CCNI2Q6ZMN8 369 aaPredicted RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 CATSPER3Q86XQ3 398 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 OSCP1Q8WVF1 389 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 HNRNPLLQ8WVV9 542 aaKnown RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 BSNDQ8WZ55 320 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 CHFRQ96EP1 664 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 LRIG1Q96JA1 1093 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 DRC1Q96MC2 740 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 SEPT5Q99719 369 aaPredicted RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 GTPBP2Q9BX10 602 aaKnown RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 TPSD1Q9BZJ3 242 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 C17orf75Q9HAS0 396 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 FBRSL1Q9HCM7 1045 aaKnown RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 POLMQ9NP87 494 aaPredicted RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 DUS2Q9NX74 493 aaKnown RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 UXTQ9UBK9 157 aaPredicted RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 DKK4Q9UBT3 224 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 DSEQ9UL01 958 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 INVSQ9Y283 1065 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 STK24Q9Y6E0 443 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 COL4A2P08572 1712 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 ASH1LQ9NR48 2969 aaKnown RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 LAMA5O15230 3695 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 TICRRQ7Z2Z1 1910 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 A0A087WWV3 80 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 OTOL1A6NHN0 477 aaPredicted RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 ZBTB24O43167 697 aaPredicted RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 VNN2O95498 520 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 OR4Q2P0C623 313 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 CSH1P0DML2 217 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 CSH2P0DML3 217 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 ODC1P11926 461 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 P2RY2P41231 377 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 PDE6CP51160 858 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 STRN3Q13033 797 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 MTF1Q14872 753 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 CRY1Q16526 586 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 HAUS3Q68CZ6 603 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 SLC36A4Q6YBV0 504 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 MON1AQ86VX9 555 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 METTL23Q86XA0 190 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 THEM5Q8N1Q8 247 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 MAB21L3Q8N8X9 362 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 CEP120Q8N960 986 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 LSM14AQ8ND56 463 aaKnown RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 OLIG1Q8TAK6 271 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 SPPL2BQ8TCT7 592 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 USP33Q8TEY7 942 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 USP13Q92995 863 aaPredicted RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 AIFM3Q96NN9 605 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 MTMR9Q96QG7 549 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 UBL7Q96S82 380 aaPredicted RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 KIFC3Q9BVG8 833 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 CRISPLD1Q9H336 500 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 CACNA2D2Q9NY47 1150 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 BCCIPQ9P287 314 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMG1-216ENST00000569122 PILRBQ9UKJ0 227 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 CIZ1Q9ULV3 898 aaPredicted RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 MMP17Q9ULZ9 603 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 UBQLN1Q9UMX0 589 aaKnown RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 TIMM13Q9Y5L4 95 aaPredicted RBP9.41□□□□□ -0.9
SMG1-216ENST00000569122 SNX14Q9Y5W7 946 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 WDR81Q562E7 1941 aa9.41□□□□□ -0.9
SMG1-216ENST00000569122 STK36Q9NRP7 1315 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 CAPN8A6NHC0 703 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 MYMKA6NI61 221 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 ARHGAP33O14559 1287 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 TOM1L1O75674 476 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 LARGE1O95461 756 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 NFATC1O95644 943 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 EDN1P05305 212 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 ARSAP15289 507 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 BCKDHBP21953 392 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 PROZP22891 400 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 NLRP12P59046 1061 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 FAM160A1Q05DH4 1040 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 NOLC1Q14978 699 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMG1-216ENST00000569122 SLC10A6Q3KNW5 377 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 EOGTQ5NDL2 527 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 PEAR1Q5VY43 1037 aaPredicted RBP9.4□□□□□ -0.9
SMG1-216ENST00000569122 RUFY3Q7L099 469 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 TTC30AQ86WT1 665 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 TMEFF1Q8IYR6 380 aa9.4□□□□□ -0.9
SMG1-216ENST00000569122 DCP1BQ8IZD4 617 aaKnown RBP9.4□□□□□ -0.9
SMG1-216ENST00000569122 KIAA1958Q8N8K9 716 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms