RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 RAP1GAPP47736 663 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 FXR1P51114 621 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDH3-210ENST00000569117 YWHAEP62258 255 aaKnown RBP11.16□□□□□ -0.62
CDH3-210ENST00000569117 TMEM164Q5U3C3 297 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 DESI1Q6ICB0 168 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 DSTYKQ6XUX3 929 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.16□□□□□ -0.62
CDH3-210ENST00000569117 CACNA2D4Q7Z3S7 1137 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 ADGRF2Q8IZF7 708 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 TMEM86AQ8N2M4 240 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 PDCL2Q8N4E4 241 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 APPL2Q8NEU8 664 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 KBTBD7Q8WVZ9 684 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 BAP1Q92560 729 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 TMEM169Q96HH4 297 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 PDLIM2Q96JY6 352 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 SAMD11Q96NU1 681 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 MMS19Q96T76 1030 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 PLVAPQ9BX97 442 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 STK33Q9BYT3 514 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 PBX4Q9BYU1 374 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 GPR88Q9GZN0 384 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 SDCBP2Q9H190 292 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 UBE2TQ9NPD8 197 aaPredicted RBP11.16□□□□□ -0.62
CDH3-210ENST00000569117 NLRC4Q9NPP4 1024 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 CISHQ9NSE2 258 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 SPG21Q9NZD8 308 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 IMPACTQ9P2X3 320 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 STK39Q9UEW8 545 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 DSEQ9UL01 958 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 CAPN11Q9UMQ6 739 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 CNTN6Q9UQ52 1028 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 YBX2Q9Y2T7 364 aaKnown RBP11.16□□□□□ -0.62
CDH3-210ENST00000569117 PCDHB12Q9Y5F1 795 aa11.16□□□□□ -0.62
CDH3-210ENST00000569117 C5orf67F2Z3F1 127 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 I3L4J1 428 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 CILPO75339 1184 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 TPM1P09493 284 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 WEE2P0C1S8 567 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 FBXO45P0C2W1 286 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 MYOGP15173 224 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 FGFR3P22607 806 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 WARSP23381 471 aaKnown RBP11.15□□□□□ -0.62
CDH3-210ENST00000569117 CASP14P31944 242 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 CTNNB1P35222 781 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 SMAD3P84022 425 aaKnown RBP11.15□□□□□ -0.62
CDH3-210ENST00000569117 ZBED6P86452 979 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 PLCB3Q01970 1234 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 RAPGEF1Q13905 1077 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 ARID5BQ14865 1188 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 DRAP1Q14919 205 aaPredicted RBP11.15□□□□□ -0.62
CDH3-210ENST00000569117 ARHGAP44Q17R89 818 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 PPFIBP1Q86W92 1011 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 CNGA4Q8IV77 575 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 FMNL3Q8IVF7 1028 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 SPAG5Q96R06 1193 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 HERC2P3Q9BVR0 1158 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 VN1R3Q9BXE9 311 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 GPR62Q9BZJ7 368 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 NUCKS1Q9H1E3 243 aaKnown RBP11.15□□□□□ -0.62
CDH3-210ENST00000569117 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 CHD9Q3L8U1 2897 aa11.15□□□□□ -0.62
CDH3-210ENST00000569117 PTPRDP23468 1912 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 LRRC53A6NM62 1247 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 GOLGA6L6A8MZA4 724 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 RNF225M0QZC1 329 aaPredicted RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 GABRDO14764 452 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 FGF18O76093 207 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 SOD2P04179 222 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 CD58P19256 250 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 TKTP29401 623 aaKnown RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 SOX5P35711 763 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 BMPR1AP36894 532 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 PBX2P40425 430 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 ZNF132P52740 706 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 ERVK-21P61565 698 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 TAP1Q03518 808 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 YWHAHQ04917 246 aaPredicted RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 FAM171A1Q5VUB5 890 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 WSCD1Q658N2 575 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 PDXDC1Q6P996 788 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 LYPD8Q6UX82 237 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 DDX53Q86TM3 631 aaKnown RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 UNC93AQ86WB7 457 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 DRC7Q8IY82 874 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 FAM71AQ8IYT1 594 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 ZNF397Q8NF99 534 aaPredicted RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 STK32AQ8WU08 396 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 TGS1Q96RS0 853 aaKnown RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 DNAJC7Q99615 494 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 MRPL45Q9BRJ2 306 aaKnown RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 C17orf80Q9BSJ5 609 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 MSRAQ9UJ68 235 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 BARX2Q9UMQ3 279 aaPredicted RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 LZTS1Q9Y250 596 aa11.14□□□□□ -0.63
CDH3-210ENST00000569117 LUC7L2Q9Y383 392 aaKnown RBP11.14□□□□□ -0.63
CDH3-210ENST00000569117 OAZ2O95190 189 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 RB1P06400 928 aa11.13□□□□□ -0.63
CDH3-210ENST00000569117 PNMA6AP0CW24 399 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms