RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 LHX5Q9H2C1 402 aa10.2□□□□□ -0.78
TCF4-240ENST00000568673 CCDC134Q9H6E4 229 aa10.2□□□□□ -0.78
TCF4-240ENST00000568673 MINDY3Q9H8M7 445 aa10.2□□□□□ -0.78
TCF4-240ENST00000568673 RPF1Q9H9Y2 349 aaKnown RBP10.2□□□□□ -0.78
TCF4-240ENST00000568673 DDX56Q9NY93 547 aaKnown RBP10.2□□□□□ -0.78
TCF4-240ENST00000568673 ERAP1Q9NZ08 941 aa10.2□□□□□ -0.78
TCF4-240ENST00000568673 STRIP2Q9ULQ0 834 aa10.2□□□□□ -0.78
TCF4-240ENST00000568673 KRT1P04264 644 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 IQCF3P0C7M6 154 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 ATF7P17544 494 aaPredicted RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 ATP5DP30049 168 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 POLR2BP30876 1174 aaKnown RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 CLCN3P51790 818 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 POU5F1BQ06416 359 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 TFDP3Q5H9I0 405 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 IZUMO3Q5VZ72 239 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 HIBCHQ6NVY1 386 aaPredicted RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 SPOCD1Q6ZMY3 1216 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 CEP128Q6ZU80 1094 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 MOB2Q70IA6 237 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 CDR2LQ86X02 465 aaPredicted RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 CACNA2D3Q8IZS8 1091 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 CDT1Q9H211 546 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 RNPEPQ9H4A4 650 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 PRMT7Q9NVM4 692 aaPredicted RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 KLHL11Q9NVR0 708 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 NINJ2Q9NZG7 142 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 DNPEPQ9ULA0 475 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 DRG1Q9Y295 367 aaKnown RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 SIGLEC16A6NMB1 481 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 MED7O43513 233 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 CXCL8P10145 99 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 P3H1Q32P28 736 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 WDR72Q3MJ13 1102 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 TTC31Q49AM3 519 aaPredicted RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 ZNF667Q5HYK9 610 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 CYP4A22Q5TCH4 519 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 POLNQ7Z5Q5 900 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 TMEM192Q8IY95 271 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 ARHGEF2Q92974 986 aaKnown RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 PWWP2AQ96N64 755 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 BCO2Q9BYV7 579 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 IFT122Q9HBG6 1241 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 PDGFCQ9NRA1 345 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 DNAJC17Q9NVM6 304 aaKnown RBP10.19□□□□□ -0.78
TCF4-240ENST00000568673 ZNF148Q9UQR1 794 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 SBF1O95248 1867 aa10.19□□□□□ -0.78
TCF4-240ENST00000568673 hCG_1818297A0A087WSY0 165 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 ASB14A6NK59 587 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 GPR25O00155 361 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 FSBPO95073 299 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 C22orf31O95567 290 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 KRT19P08727 400 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 KRT3P12035 628 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 CD19P15391 556 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 RFC1P35251 1148 aaPredicted RBP10.18□□□□□ -0.78
TCF4-240ENST00000568673 CDKN2BP42772 138 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 TTLL12Q14166 644 aaPredicted RBP10.18□□□□□ -0.78
TCF4-240ENST00000568673 CNGA2Q16280 664 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 FAM187BQ17R55 369 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 PTPN20Q4JDL3 420 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 CCDC38Q502W7 563 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 EAPPQ56P03 285 aaPredicted RBP10.18□□□□□ -0.78
TCF4-240ENST00000568673 RNF187Q5TA31 235 aaPredicted RBP10.18□□□□□ -0.78
TCF4-240ENST00000568673 WDR78Q5VTH9 848 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 TXNRD3NBQ6F5E7 133 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 DENND1BQ6P3S1 775 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 PACS2Q86VP3 889 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 ZCCHC9Q8N567 271 aaKnown RBP10.18□□□□□ -0.78
TCF4-240ENST00000568673 ALLCQ8N6M5 410 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 C1orf127Q8N9H9 656 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 FNIP1Q8TF40 1166 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 OPTNQ96CV9 577 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 ZBTB10Q96DT7 871 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 PRMT1Q99873 361 aaKnown RBP10.18□□□□□ -0.78
TCF4-240ENST00000568673 SIX4Q9UIU6 781 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 POLIQ9UNA4 740 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 MCM3APO60318 1980 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 INSRRP14616 1297 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 RAD23BP54727 409 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 ZNF484Q5JVG2 852 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 CCDC121Q6ZUS5 278 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 PRUNE1Q86TP1 453 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 CDCA5Q96FF9 252 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 RBM15Q96T37 977 aaKnown RBP eCLIP10.18□□□□□ -0.78
TCF4-240ENST00000568673 CCDC77Q9BR77 488 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
TCF4-240ENST00000568673 EFR3BQ9Y2G0 817 aa10.18□□□□□ -0.78
TCF4-240ENST00000568673 EVPLQ92817 2033 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 ANK1P16157 1881 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 LRRD1A4D1F6 860 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 LACTBL1A8MY62 500 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 DNALI1O14645 258 aaPredicted RBP10.17□□□□□ -0.78
TCF4-240ENST00000568673 CDH16O75309 829 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 ITGAVP06756 1048 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 STAG3L1P0CL83 205 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 MCF2P10911 925 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 PSMA2P25787 234 aa10.17□□□□□ -0.78
TCF4-240ENST00000568673 MAGEA4P43358 317 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms