RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 RBM43Q6ZSC3 357 aaKnown RBP9.04□□□□□ -0.96
TSC2-223ENST00000568566 BRSK2Q8IWQ3 736 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 GPD1LQ8N335 351 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 CXorf38Q8TB03 319 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 LNX1Q8TBB1 728 aaPredicted RBP9.04□□□□□ -0.96
TSC2-223ENST00000568566 NELFBQ8WX92 580 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 PIK3R5Q8WYR1 880 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 NELL1Q92832 810 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 CLDN23Q96B33 292 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 CCDC127Q96BQ5 260 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 BORCS6Q96GS4 357 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 TMEM206Q9H813 350 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.04□□□□□ -0.963e-6■■■■■ 142.4
TSC2-223ENST00000568566 KCNG1Q9UIX4 513 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 NDRG2Q9UN36 371 aaKnown RBP9.04□□□□□ -0.96
TSC2-223ENST00000568566 TRAF3IP3Q9Y228 551 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.04□□□□□ -0.96
TSC2-223ENST00000568566 ZFYVE26Q68DK2 2539 aa9.04□□□□□ -0.96
TSC2-223ENST00000568566 FRYQ5TBA9 3013 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 TRIP11Q15643 1979 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 TBC1D4O60343 1298 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 CST3P01034 146 aaPredicted RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 THP07101 528 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 TRIM49P0CI25 452 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 TRIM49CP0CI26 452 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 CEBPBP17676 345 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 CCNE1P24864 410 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 RPS9P46781 194 aaKnown RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 YARSP54577 528 aaKnown RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 NLRP12P59046 1061 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 TFAMQ00059 246 aaKnown RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 CYP24A1Q07973 514 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 GRM2Q14416 872 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 SNRNP35Q16560 246 aaKnown RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 HSP90AA4PQ58FG1 418 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 CEP135Q66GS9 1140 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 PRR23BQ6ZRT6 265 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 IRF2BP1Q8IU81 584 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 C12orf56Q8IXR9 622 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 XXYLT1Q8NBI6 393 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 CCDC47Q96A33 483 aaKnown RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 MCRS1Q96EZ8 462 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 PLA2G2FQ9BZM2 168 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 RBAKQ9NYW8 714 aaPredicted RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 DNMT3BQ9UBC3 853 aaKnown RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 SIX4Q9UIU6 781 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 RAB23Q9ULC3 237 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 MRPS17Q9Y2R5 130 aaKnown RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 MRPS23Q9Y3D9 190 aaKnown RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 TIMM13Q9Y5L4 95 aaPredicted RBP9.03□□□□□ -0.96
TSC2-223ENST00000568566 UBE4BO95155 1302 aa9.03□□□□□ -0.96
TSC2-223ENST00000568566 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.02□□□□□ -0.97
TSC2-223ENST00000568566 SHISA7A6NL88 538 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 LRRIQ3A6PVS8 624 aaPredicted RBP9.02□□□□□ -0.97
TSC2-223ENST00000568566 GOLGA6L22H0YM25 854 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 NCAM2O15394 837 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 HCRTO43612 131 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 EXOC3O60645 756 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 ECI2O75521 394 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 RHOP08100 348 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 DLATP10515 647 aaKnown RBP9.02□□□□□ -0.97
TSC2-223ENST00000568566 TDGF1P13385 188 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 NR2F2P24468 414 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 OR1D2P34982 312 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 PPP2R3AQ06190 1150 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 PPP3CAQ08209 521 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 ADCY1Q08828 1119 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 ADAM9Q13443 819 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 FZD5Q13467 585 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 CCDC142Q17RM4 750 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 COBLL1Q53SF7 1204 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 SPATA1Q5VX52 437 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 LAIR1Q6GTX8 287 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 TANGO2Q6ICL3 276 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 POTEHQ6S545 545 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 STXBP4Q6ZWJ1 553 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 HS2ST1Q7LGA3 356 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 ZC3H3Q8IXZ2 948 aaKnown RBP9.02□□□□□ -0.97
TSC2-223ENST00000568566 C1orf127Q8N9H9 656 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 NETO1Q8TDF5 533 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 NELL2Q99435 816 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 FAM126AQ9BYI3 521 aaPredicted RBP9.02□□□□□ -0.97
TSC2-223ENST00000568566 MTMR12Q9C0I1 747 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 RMND1Q9NWS8 449 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 CDY1Q9Y6F8 540 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 SDK1Q7Z5N4 2213 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 IGF2RP11717 2491 aa9.02□□□□□ -0.97
TSC2-223ENST00000568566 TICRRQ7Z2Z1 1910 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 ANO9A1A5B4 782 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 ZNF233A6NK53 670 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 PODXLO00592 558 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 SLC30A4O14863 429 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 VNN1O95497 513 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 MBD3O95983 291 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 COL4A2P08572 1712 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 POU2F2P09086 479 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 ANK1P16157 1881 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 FCARP24071 287 aa9.01□□□□□ -0.97
TSC2-223ENST00000568566 TKTP29401 623 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms