RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 AGO2Q9UKV8 859 aaKnown RBP16.78■□□□□ 0.28
NME3-211ENST00000568561 SMC3Q9UQE7 1217 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 KMT2BQ9UMN6 2715 aaPredicted RBP16.78■□□□□ 0.28
NME3-211ENST00000568561 CNOT1A5YKK6 2376 aaKnown RBP16.78■□□□□ 0.28
NME3-211ENST00000568561 EML5Q05BV3 1969 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 SLC26A4O43511 780 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 FGF19O95750 216 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 TAF6P49848 677 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
NME3-211ENST00000568561 PKN3Q6P5Z2 889 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 USP49Q70CQ1 688 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 DYMQ7RTS9 669 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.77■□□□□ 0.28
NME3-211ENST00000568561 METTL23Q86XA0 190 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 CNTNAP3BQ96NU0 1288 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 GCNAQ96QF7 691 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 SLC46A2Q9BY10 475 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 CNTNAP3Q9BZ76 1288 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 DERAQ9Y315 318 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 C2CD2Q9Y426 696 aa16.77■□□□□ 0.28
NME3-211ENST00000568561 RETP07949 1114 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 SDHBP21912 280 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 SCP2P22307 547 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 CDC25CP30307 473 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 LONP1P36776 959 aaKnown RBP16.76■□□□□ 0.27
NME3-211ENST00000568561 PXNP49023 591 aaPredicted RBP16.76■□□□□ 0.27
NME3-211ENST00000568561 TUFMP49411 452 aaKnown RBP16.76■□□□□ 0.27
NME3-211ENST00000568561 GPR15P49685 360 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 MCM2P49736 904 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 WNT7BP56706 349 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 CCINQ13939 588 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 TAF12Q16514 161 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 DGKKQ5KSL6 1271 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 SDHAF4Q5VUM1 108 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 LARP1BQ659C4 914 aaKnown RBP16.76■□□□□ 0.27
NME3-211ENST00000568561 C1orf228Q6PIY5 440 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 CRELD2Q6UXH1 353 aaPredicted RBP16.76■□□□□ 0.27
NME3-211ENST00000568561 LONP2Q86WA8 852 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 ZSWIM2Q8NEG5 633 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 EPSTI1Q96J88 318 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 ASB7Q9H672 318 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 SEMA4GQ9NTN9 838 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 TMLHEQ9NVH6 421 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 OBP2AQ9NY56 170 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 HSFX1Q9UBD0 423 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 DSEQ9UL01 958 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 CCL26Q9Y258 94 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 GREB1Q4ZG55 1949 aa16.76■□□□□ 0.27
NME3-211ENST00000568561 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.75■□□□□ 0.27
NME3-211ENST00000568561 EXTL3O43909 919 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 PAPSS2O95340 614 aaPredicted RBP16.75■□□□□ 0.27
NME3-211ENST00000568561 HAPLN1P10915 354 aaPredicted RBP16.75■□□□□ 0.27
NME3-211ENST00000568561 ADSSP30520 456 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 KCNA1Q09470 495 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 CCDC142Q17RM4 750 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 ITPRIPL2Q3MIP1 535 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 SCARA3Q6AZY7 606 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 TRIM68Q6AZZ1 485 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 TMEM150AQ86TG1 271 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 THEM5Q8N1Q8 247 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 POMGNT1Q8WZA1 660 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 SAAL1Q96ER3 474 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 RTKNQ9BST9 563 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 POLR3BQ9NW08 1133 aaPredicted RBP16.75■□□□□ 0.27
NME3-211ENST00000568561 TBC1D7Q9P0N9 293 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 STYXL1Q9Y6J8 313 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 MYO16Q9Y6X6 1858 aa16.75■□□□□ 0.27
NME3-211ENST00000568561 KPNA7A9QM74 516 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 GDF9O60383 454 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 PAX3P23760 479 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 PLCB2Q00722 1185 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 SV2CQ496J9 727 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 SLFN12LQ6IEE8 588 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 PRR23CQ6ZRP0 262 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 CEP68Q76N32 757 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 CMTM8Q8IZV2 173 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 FAM160A2Q8N612 972 aaPredicted RBP16.74■□□□□ 0.27
NME3-211ENST00000568561 MAB21L3Q8N8X9 362 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 KRI1Q8N9T8 703 aaKnown RBP16.74■□□□□ 0.27
NME3-211ENST00000568561 RIN3Q8TB24 985 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 SPPL2BQ8TCT7 592 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 CHFRQ96EP1 664 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 PI4K2AQ9BTU6 479 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 EBF3Q9H4W6 596 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 HPS4Q9NQG7 708 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 GKN1Q9NS71 199 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 MAGED2Q9UNF1 606 aaPredicted RBP16.74■□□□□ 0.27
NME3-211ENST00000568561 KIAA1549LQ6ZVL6 1849 aa16.74■□□□□ 0.27
NME3-211ENST00000568561 ANAPC1Q9H1A4 1944 aa16.73■□□□□ 0.27
NME3-211ENST00000568561 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
NME3-211ENST00000568561 OTOL1A6NHN0 477 aaPredicted RBP16.73■□□□□ 0.27
NME3-211ENST00000568561 BMP15O95972 392 aa16.73■□□□□ 0.27
NME3-211ENST00000568561 HMGA1P17096 107 aaKnown RBP16.73■□□□□ 0.27
NME3-211ENST00000568561 ACAT1P24752 427 aaKnown RBP16.73■□□□□ 0.27
NME3-211ENST00000568561 WEE1P30291 646 aa16.73■□□□□ 0.27
NME3-211ENST00000568561 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
NME3-211ENST00000568561 AVPR1AP37288 418 aa16.73■□□□□ 0.27
NME3-211ENST00000568561 NLRP12P59046 1061 aa16.73■□□□□ 0.27
NME3-211ENST00000568561 TFAMQ00059 246 aaKnown RBP16.73■□□□□ 0.27
NME3-211ENST00000568561 CCDC6Q16204 474 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms