RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ATP6V1DQ9Y5K8 247 aa15.53■□□□□ 0.08
CMTM3-215ENST00000568477 SNX9Q9Y5X1 595 aa15.53■□□□□ 0.08
CMTM3-215ENST00000568477 PTPRJQ12913 1337 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 A0A1B0GVL5 298 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 A0A1W2PRU2 124 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 CLIC2O15247 247 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 FGF19O95750 216 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 STARD6P59095 220 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 MYL7Q01449 175 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 PRKCQQ04759 706 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 MYO1EQ12965 1108 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 SNW1Q13573 536 aaKnown RBP15.52■□□□□ 0.08
CMTM3-215ENST00000568477 SLC44A4Q53GD3 710 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 LRRTM3Q86VH5 581 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 TOP6BLQ8N6T0 577 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 XXYLT1Q8NBI6 393 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 OR5B17Q8NGF7 314 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 ZSCAN18Q8TBC5 510 aaPredicted RBP15.52■□□□□ 0.08
CMTM3-215ENST00000568477 SPATA18Q8TC71 538 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 PAGE5Q96GU1 130 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 CHAMP1Q96JM3 812 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 ZSWIM3Q96MP5 696 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 FNBP1Q96RU3 617 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 PHOX2BQ99453 314 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 ZNF334Q9HCZ1 680 aaPredicted RBP15.52■□□□□ 0.08
CMTM3-215ENST00000568477 EXOC1Q9NV70 894 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 SIT1Q9Y3P8 196 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 PCDHB5Q9Y5E4 795 aa15.52■□□□□ 0.08
CMTM3-215ENST00000568477 ZFHX2Q9C0A1 2572 aaPredicted RBP15.52■□□□□ 0.07
CMTM3-215ENST00000568477 F5P12259 2224 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 PRPF40AO75400 957 aaKnown RBP15.51■□□□□ 0.07
CMTM3-215ENST00000568477 DLATP10515 647 aaKnown RBP15.51■□□□□ 0.07
CMTM3-215ENST00000568477 HAPLN1P10915 354 aaPredicted RBP15.51■□□□□ 0.07
CMTM3-215ENST00000568477 ATF6P18850 670 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 CDR1P51861 262 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 GRM2Q14416 872 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 PSMD6Q15008 389 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 TAF12Q16514 161 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 NFE2Q16621 373 aaPredicted RBP15.51■□□□□ 0.07
CMTM3-215ENST00000568477 KNOP1Q1ED39 458 aaKnown RBP15.51■□□□□ 0.07
CMTM3-215ENST00000568477 SCARA3Q6AZY7 606 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 C12orf56Q8IXR9 622 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 ADGRF2Q8IZF7 708 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 RDH13Q8NBN7 331 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 PJA1Q8NG27 643 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 GOLGA5Q8TBA6 731 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 DEPDC1BQ8WUY9 529 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 DNASE1L2Q92874 299 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 HPDLQ96IR7 371 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 LPIN3Q9BQK8 851 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 ACBD6Q9BR61 282 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 TRMT61BQ9BVS5 477 aaKnown RBP15.51■□□□□ 0.07
CMTM3-215ENST00000568477 FOXQ1Q9C009 403 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 SCAND2PQ9GZW5 306 aaPredicted RBP15.51■□□□□ 0.07
CMTM3-215ENST00000568477 BRD9Q9H8M2 597 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 TRPV4Q9HBA0 871 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 DDX43Q9NXZ2 648 aaKnown RBP15.51■□□□□ 0.07
CMTM3-215ENST00000568477 HPSEQ9Y251 543 aa15.51■□□□□ 0.07
CMTM3-215ENST00000568477 KANSL1LA0AUZ9 987 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 KLRC4O43908 158 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 MYL1P05976 194 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 DCNP07585 359 aaKnown RBP15.5■□□□□ 0.07
CMTM3-215ENST00000568477 TNNI1P19237 187 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 GABRR2P28476 465 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 PCSK1P29120 753 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 VIPR2P41587 438 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 SYKP43405 635 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 LHX1P48742 406 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 CYP24A1Q07973 514 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 ARHGAP15Q53QZ3 475 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 INTS6LQ5JSJ4 861 aaKnown RBP15.5■□□□□ 0.07
CMTM3-215ENST00000568477 VITQ6UXI7 678 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 GAREM2Q75VX8 874 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 E2F7Q96AV8 911 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 CCDC127Q96BQ5 260 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 GCNAQ96QF7 691 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 CGRRF1Q99675 332 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 DDX23Q9BUQ8 820 aaKnown RBP15.5■□□□□ 0.07
CMTM3-215ENST00000568477 ATXN3LQ9H3M9 355 aa15.5■□□□□ 0.07
CMTM3-215ENST00000568477 RIF1Q5UIP0 2472 aaKnown RBP15.49■□□□□ 0.07
CMTM3-215ENST00000568477 EXOC3O60645 756 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 PSMC3P17980 439 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 ACAT1P24752 427 aaKnown RBP15.49■□□□□ 0.07
CMTM3-215ENST00000568477 CDC25CP30307 473 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 STK4Q13043 487 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 PSMD2Q13200 908 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 UBXN2BQ14CS0 331 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 ANGPT1Q15389 498 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 KMT5BQ4FZB7 885 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 GPR158Q5T848 1215 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 TPRG1Q6ZUI0 275 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 DPH6Q7L8W6 267 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 TRAPPC11Q7Z392 1133 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 OSTM1Q86WC4 334 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 KIAA0895Q8NCT3 520 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 GIPC2Q8TF65 315 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 IRF7Q92985 503 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 PI4K2AQ9BTU6 479 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 ABCB6Q9NP58 842 aa15.49■□□□□ 0.07
CMTM3-215ENST00000568477 TMLHEQ9NVH6 421 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms