RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 LSM8O95777 96 aaKnown RBP7.49□□□□□ -1.21
SMG1-215ENST00000568239 C1QBPQ07021 282 aaKnown RBP7.49□□□□□ -1.21
SMG1-215ENST00000568239 DCAF12L1Q5VU92 463 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 GSPT2Q8IYD1 628 aaKnown RBP7.49□□□□□ -1.21
SMG1-215ENST00000568239 MMGT1Q8N4V1 131 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 WDTC1Q8N5D0 677 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 SLAIN1Q8ND83 568 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 ACTRT1Q8TDG2 376 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 VCPIP1Q96JH7 1222 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 GDAP1L1Q96MZ0 367 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 BEGAINQ9BUH8 593 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 CFHR5Q9BXR6 569 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 DDX47Q9H0S4 455 aaKnown RBP7.49□□□□□ -1.21
SMG1-215ENST00000568239 CARD9Q9H257 536 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 TJP2Q9UDY2 1190 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 DMGDHQ9UI17 866 aaKnown RBP7.49□□□□□ -1.21
SMG1-215ENST00000568239 PCDHGC3Q9UN70 934 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 CES2O00748 559 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 HCRTO43612 131 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 CABYRO75952 493 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 MICAL2O94851 1124 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 GNRH1P01148 92 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 TAF6P49848 677 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 AFF1P51825 1210 aaKnown RBP7.49□□□□□ -1.21
SMG1-215ENST00000568239 BRD3Q15059 726 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 TCEAL1Q15170 157 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 ZNF618Q5T7W0 954 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 SEL1L2Q5TEA6 688 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 PPP1R2P3Q6NXS1 205 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 CC2D1AQ6P1N0 951 aaPredicted RBP7.49□□□□□ -1.21
SMG1-215ENST00000568239 LRRC52Q8N7C0 313 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.49□□□□□ -1.21
SMG1-215ENST00000568239 FEZF2Q8TBJ5 459 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 ZNF560Q96MR9 790 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 ZNF518BQ9C0D4 1074 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 WNT8AQ9H1J5 351 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 ZNF446Q9NWS9 450 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 TSPAN16Q9UKR8 245 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 INPP5FQ9Y2H2 1132 aa7.49□□□□□ -1.21
SMG1-215ENST00000568239 A0A0U1RQG5 324 aaPredicted RBP7.48□□□□□ -1.21
SMG1-215ENST00000568239 CCDC66A2RUB6 948 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 MOXD2PA6NHM9 499 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 SPTLC1O15269 473 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 HUS1O60921 280 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 VDRP11473 427 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 KCNE1P15382 129 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 RWDD2BP57060 319 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PSMC1P62191 440 aaKnown RBP7.48□□□□□ -1.21
SMG1-215ENST00000568239 NKX3-2P78367 333 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 ITIH3Q06033 890 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 MGAT3Q09327 533 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PTK7Q13308 1070 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 SOWAHAQ2M3V2 549 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PTPN20Q4JDL3 420 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PLEKHA7Q6IQ23 1121 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 ZNF572Q7Z3I7 529 aaPredicted RBP7.48□□□□□ -1.21
SMG1-215ENST00000568239 CCDC50Q8IVM0 306 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 IFT81Q8WYA0 676 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 C18orf8Q96DM3 657 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 FAXDC2Q96IV6 333 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 CPXM1Q96SM3 734 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 ADAM2Q99965 735 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 SNX25Q9H3E2 840 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 CYTH4Q9UIA0 394 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMG1-215ENST00000568239 ESYT3A0FGR9 886 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 O00370 1275 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PIRO00625 290 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PTGESO14684 152 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 STAU1O95793 577 aaKnown RBP7.48□□□□□ -1.21
SMG1-215ENST00000568239 POMCP01189 267 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
SMG1-215ENST00000568239 THP07101 528 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PYGMP11217 842 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 GNL1P36915 607 aaPredicted RBP7.48□□□□□ -1.21
SMG1-215ENST00000568239 RGS7P49802 495 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 SCNN1GP51170 649 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 GUCY2DQ02846 1103 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 INCA1Q0VD86 236 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PTP4A2Q12974 167 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 LPIN1Q14693 890 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 CNGA2Q16280 664 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 ODF2Q5BJF6 829 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 PPP1R26Q5T8A7 1209 aaPredicted RBP7.48□□□□□ -1.21
SMG1-215ENST00000568239 LHX8Q68G74 356 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 APPL2Q8NEU8 664 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 NAP1L3Q99457 506 aaPredicted RBP7.48□□□□□ -1.21
SMG1-215ENST00000568239 LPIN3Q9BQK8 851 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 DPEP3Q9H4B8 488 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 CHST12Q9NRB3 414 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 RAB21Q9UL25 225 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMG1-215ENST00000568239 RALGAPA2Q2PPJ7 1873 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 THSD7BQ9C0I4 1608 aa7.48□□□□□ -1.21
SMG1-215ENST00000568239 GOLGA6L10A0A0M3HER8 536 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 A0A1W2PQ45 241 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 A0A1W2PQY0 241 aa7.47□□□□□ -1.21
SMG1-215ENST00000568239 TARSL2A2RTX5 802 aaKnown RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 ZSCAN5CA6NGD5 496 aaPredicted RBP7.47□□□□□ -1.21
SMG1-215ENST00000568239 CASTOR2A6NHX0 329 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms