RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 VPS13AQ96RL7 3174 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 WDR87Q6ZQQ6 2873 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 SHISA7A6NL88 538 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 ZNF263O14978 683 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 TMEM191BP0C7N4 346 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 SP9P0CG40 484 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 PSMC3P17980 439 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 PAX3P23760 479 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 DNM1Q05193 864 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 TAF12Q16514 161 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 FAM26FQ5R3K3 315 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 ZNF852Q6ZMS4 543 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 NT5DC4Q86YG4 428 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 ARID3BQ8IVW6 561 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 CACTINQ8WUQ7 758 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 ZNF560Q96MR9 790 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 LRRC3BQ96PB8 259 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 LRRC27Q9C0I9 530 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 HSPBP1Q9NZL4 362 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 SIX4Q9UIU6 781 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 SNX9Q9Y5X1 595 aa13.16□□□□□ -0.3
GTF3C1-208ENST00000567843 ZNF233A6NK53 670 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 HUS1O60921 280 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 PRPF40AO75400 957 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 HAPLN1P10915 354 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 PNPLA4P41247 253 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 SOX9P48436 509 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 TUFMP49411 452 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 CYP2J2P51589 502 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 RBP5P82980 135 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 AMPD3Q01432 767 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 POU5F1Q01860 360 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 CSTF1Q05048 431 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 CUL4BQ13620 913 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 VEPH1Q14D04 833 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 TSSK4Q6SA08 328 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 STXBP4Q6ZWJ1 553 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 ITIH5Q86UX2 942 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 MFSD6LQ8IWD5 586 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 YAF2Q8IY57 180 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 DCP1BQ8IZD4 617 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 MAML2Q8IZL2 1156 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 ADSSL1Q8N142 457 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 IRF7Q92985 503 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 MKNK1Q9BUB5 465 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 CUEDC2Q9H467 287 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 IL21Q9HBE4 155 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 SLC39A2Q9NP94 309 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 INTS13Q9NVM9 706 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 DDX43Q9NXZ2 648 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 FAM13BQ9NYF5 915 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 GTF3C4Q9UKN8 822 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 ASB3Q9Y575 518 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 PCDHB5Q9Y5E4 795 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 PIAS3Q9Y6X2 628 aa13.15□□□□□ -0.3
GTF3C1-208ENST00000567843 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 DPYSL4O14531 572 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 TGFB1I1O43294 461 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 LAMTOR5O43504 91 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 PRAMEF12O95522 483 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 DLATP10515 647 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 CYP2F1P24903 491 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 TSPY1Q01534 308 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 DDR2Q16832 855 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 RESP18Q5W5W9 173 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 EPM2AIP1Q7L775 607 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 TTC16Q8NEE8 873 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 SPPL2BQ8TCT7 592 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 DEPDC1BQ8WUY9 529 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 SCFD1Q8WVM8 642 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 CCDC127Q96BQ5 260 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 ANKRD36BP1Q96IX9 119 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 GPR88Q9GZN0 384 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 ITGA11Q9UKX5 1188 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 R3HCC1Q9Y3T6 440 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
GTF3C1-208ENST00000567843 MYBPHLA2RUH7 354 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 ATP2C2O75185 946 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 TNNC2P02585 160 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 CCNE1P24864 410 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 MYL7Q01449 175 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 FZD5Q13467 585 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 SOWAHAQ2M3V2 549 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 ARHGAP15Q53QZ3 475 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 ADGRF2Q8IZF7 708 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 LRRC52Q8N7C0 313 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 CSGALNACT1Q8TDX6 532 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 FAM3CQ92520 227 aa13.13□□□□□ -0.31
GTF3C1-208ENST00000567843 HPDLQ96IR7 371 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms