RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 STX17P56962 302 aa23.18■■□□□ 1.3
NME3-210ENST00000567271 C2orf15Q8WU43 125 aaKnown RBP23.18■■□□□ 1.3
NME3-210ENST00000567271 TAF4BQ92750 862 aa23.18■■□□□ 1.3
NME3-210ENST00000567271 TMEM8AQ9HCN3 771 aa23.18■■□□□ 1.3
NME3-210ENST00000567271 DNMT3BQ9UBC3 853 aaKnown RBP23.18■■□□□ 1.3
NME3-210ENST00000567271 HSFX1Q9UBD0 423 aa23.18■■□□□ 1.3
NME3-210ENST00000567271 NXF1Q9UBU9 619 aaKnown RBP23.18■■□□□ 1.3
NME3-210ENST00000567271 DENND4AQ7Z401 1863 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 HCRTO43612 131 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 STX10O60499 249 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 HLA-DRAP01903 254 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 LMO2P25791 158 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 PCSK1P29120 753 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 NTHL1P78549 312 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 TWF1Q12792 350 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 ZNF667Q5HYK9 610 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 INTS6LQ5JSJ4 861 aaKnown RBP23.17■■□□□ 1.3
NME3-210ENST00000567271 KRT39Q6A163 491 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 OTOP3Q7RTS5 596 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 RNF135Q8IUD6 432 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 TDRD5Q8NAT2 981 aaKnown RBP23.17■■□□□ 1.3
NME3-210ENST00000567271 TAS1R2Q8TE23 839 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 ACSF2Q96CM8 615 aaPredicted RBP23.17■■□□□ 1.3
NME3-210ENST00000567271 PKMYT1Q99640 499 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 MRPL45Q9BRJ2 306 aaKnown RBP23.17■■□□□ 1.3
NME3-210ENST00000567271 MMRN2Q9H8L6 949 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 TMLHEQ9NVH6 421 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 HCFC1R1Q9NWW0 138 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 ARMCX3Q9UH62 379 aaPredicted RBP23.17■■□□□ 1.3
NME3-210ENST00000567271 YIPF1Q9Y548 306 aa23.17■■□□□ 1.3
NME3-210ENST00000567271 ASS1P00966 412 aaKnown RBP23.16■■□□□ 1.3
NME3-210ENST00000567271 PTPN2P17706 415 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 GNL1P36915 607 aaPredicted RBP23.16■■□□□ 1.3
NME3-210ENST00000567271 PIK3CAP42336 1068 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 CDR1P51861 262 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 FRMD5Q7Z6J6 570 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 ZDHHC14Q8IZN3 488 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 MLKLQ8NB16 471 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 SPPL2BQ8TCT7 592 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 KHSRPQ92945 711 aaKnown RBP eCLIP23.16■■□□□ 1.3
NME3-210ENST00000567271 ELMO3Q96BJ8 720 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 SNX25Q9H3E2 840 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 METTL14Q9HCE5 456 aaKnown RBP23.16■■□□□ 1.3
NME3-210ENST00000567271 CEP72Q9P209 647 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 RWDD2AQ9UIY3 292 aa23.16■■□□□ 1.3
NME3-210ENST00000567271 N4BP1O75113 896 aaKnown RBP23.15■■□□□ 1.3
NME3-210ENST00000567271 FSHRP23945 695 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 PLD1Q13393 1074 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 NFE2Q16621 373 aaPredicted RBP23.15■■□□□ 1.3
NME3-210ENST00000567271 DCAF17Q5H9S7 520 aaPredicted RBP23.15■■□□□ 1.3
NME3-210ENST00000567271 TCERG1LQ5VWI1 586 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 PLCD3Q8N3E9 789 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 TTC9BQ8N6N2 239 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 GTF3C4Q9UKN8 822 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 CDH9Q9ULB4 789 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 NME7Q9Y5B8 376 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 PCDHB5Q9Y5E4 795 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 DOCK6Q96HP0 2047 aa23.15■■□□□ 1.3
NME3-210ENST00000567271 MYBPHLA2RUH7 354 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 CLSTN1O94985 981 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 PDGFRBP09619 1106 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 P4HA1P13674 534 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 ALDH1A3P47895 512 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 TUFMP49411 452 aaKnown RBP23.14■■□□□ 1.29
NME3-210ENST00000567271 MXI1P50539 228 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 PABPC1LQ4VXU2 614 aaKnown RBP23.14■■□□□ 1.29
NME3-210ENST00000567271 SPOPLQ6IQ16 392 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 FAM171BQ6P995 826 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 ELMOD1Q8N336 334 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 OR6B3Q8NGW1 331 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 SLC35C1Q96A29 364 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 ZNF512Q96ME7 567 aaPredicted RBP23.14■■□□□ 1.29
NME3-210ENST00000567271 MYADMQ96S97 322 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 SYT15Q9BQS2 421 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 PI4K2AQ9BTU6 479 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 SRRTQ9BXP5 876 aaKnown RBP23.14■■□□□ 1.29
NME3-210ENST00000567271 SMYD3Q9H7B4 428 aa23.14■■□□□ 1.29
NME3-210ENST00000567271 AVENQ9NQS1 362 aaPredicted RBP23.14■■□□□ 1.29
NME3-210ENST00000567271 ABI2Q9NYB9 513 aaPredicted RBP23.14■■□□□ 1.29
NME3-210ENST00000567271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.14■■□□□ 1.291e-9■■■■■ 33.5
NME3-210ENST00000567271 ATP2C2O75185 946 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 SOAT2O75908 522 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 MBD3O95983 291 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 RHOP08100 348 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 HAPLN1P10915 354 aaPredicted RBP23.13■■□□□ 1.29
NME3-210ENST00000567271 GBP2P32456 591 aaPredicted RBP23.13■■□□□ 1.29
NME3-210ENST00000567271 EPHB3P54753 998 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 CDH8P55286 799 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 MGAT5BQ3V5L5 792 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 CCDC40Q4G0X9 1142 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 IQCEQ6IPM2 695 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 GET4Q7L5D6 327 aaPredicted RBP23.13■■□□□ 1.29
NME3-210ENST00000567271 MED15Q96RN5 788 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 SEPT5Q99719 369 aaPredicted RBP23.13■■□□□ 1.29
NME3-210ENST00000567271 CORO1BQ9BR76 489 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 DNAJC25Q9H1X3 360 aa23.13■■□□□ 1.29
NME3-210ENST00000567271 LRRN2O75325 713 aa23.12■■□□□ 1.29
NME3-210ENST00000567271 GNA14O95837 355 aa23.12■■□□□ 1.29
NME3-210ENST00000567271 ASPAP45381 313 aa23.12■■□□□ 1.29
NME3-210ENST00000567271 RAP1GAPP47736 663 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms