RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 ARSAP15289 507 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 TYMPP19971 482 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 LRPAP1P30533 357 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 RDXP35241 583 aaKnown RBP18.28■□□□□ 0.52
CDH3-205ENST00000566808 GALK1P51570 392 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 SCRN1Q12765 414 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 TRIM61Q5EBN2 209 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 CC2D1AQ6P1N0 951 aaPredicted RBP18.28■□□□□ 0.52
CDH3-205ENST00000566808 PIP4P1Q86T03 277 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 RASSF3Q86WH2 238 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 CPA6Q8N4T0 437 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 CCDC26Q8TAB7 109 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 WASF1Q92558 559 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 PIGKQ92643 395 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 CNOT6LQ96LI5 555 aaKnown RBP18.28■□□□□ 0.52
CDH3-205ENST00000566808 LPIN3Q9BQK8 851 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 LARP6Q9BRS8 491 aaKnown RBP18.28■□□□□ 0.52
CDH3-205ENST00000566808 TARS2Q9BW92 718 aaKnown RBP18.28■□□□□ 0.52
CDH3-205ENST00000566808 NUSAP1Q9BXS6 441 aaKnown RBP18.28■□□□□ 0.52
CDH3-205ENST00000566808 TPSD1Q9BZJ3 242 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 ARHGAP28Q9P2N2 729 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 CCL26Q9Y258 94 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 INVSQ9Y283 1065 aa18.28■□□□□ 0.52
CDH3-205ENST00000566808 CCDC169A6NNP5 214 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 ATF6P18850 670 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 BCKDHBP21953 392 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 MUTP22033 750 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 DDX6P26196 483 aaKnown RBP eCLIP18.27■□□□□ 0.52
CDH3-205ENST00000566808 GJA4P35212 333 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 MAPK8P45983 427 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 NPTX2P47972 431 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 DHPSP49366 369 aaPredicted RBP18.27■□□□□ 0.52
CDH3-205ENST00000566808 TUFMP49411 452 aaKnown RBP18.27■□□□□ 0.52
CDH3-205ENST00000566808 NOLC1Q14978 699 aaKnown RBP eCLIP18.27■□□□□ 0.52
CDH3-205ENST00000566808 SLC10A6Q3KNW5 377 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 NAIF1Q69YI7 327 aaPredicted RBP18.27■□□□□ 0.52
CDH3-205ENST00000566808 ARMCX5Q6P1M9 558 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 TAS1R3Q7RTX0 852 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 EZH1Q92800 747 aaPredicted RBP18.27■□□□□ 0.52
CDH3-205ENST00000566808 USP13Q92995 863 aaPredicted RBP18.27■□□□□ 0.52
CDH3-205ENST00000566808 SEPT5Q99719 369 aaPredicted RBP18.27■□□□□ 0.52
CDH3-205ENST00000566808 TDP1Q9NUW8 608 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 MYH11P35749 1972 aa18.27■□□□□ 0.52
CDH3-205ENST00000566808 HELZP42694 1942 aaKnown RBP18.26■□□□□ 0.51
CDH3-205ENST00000566808 ADAMTS9Q9P2N4 1935 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 U2AF2P26368 475 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDH3-205ENST00000566808 PEX3P56589 373 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 SEMA3BQ13214 749 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 DMP1Q13316 513 aaPredicted RBP18.26■□□□□ 0.51
CDH3-205ENST00000566808 TAF12Q16514 161 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 HAUS3Q68CZ6 603 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 ANO7Q6IWH7 933 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 DSTYKQ6XUX3 929 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 CD101Q93033 1021 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 TMEM60Q9H2L4 133 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 BHMT2Q9H2M3 363 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 POLD4Q9HCU8 107 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 ANKFY1Q9P2R3 1169 aa18.26■□□□□ 0.51
CDH3-205ENST00000566808 ORC3Q9UBD5 711 aaPredicted RBP18.26■□□□□ 0.51
CDH3-205ENST00000566808 TCHHQ07283 1943 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 REC8O95072 547 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 ODC1P11926 461 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 ENGP17813 658 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 DPP6P42658 865 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 PSMD2Q13200 908 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 ZNF268Q14587 947 aaPredicted RBP18.25■□□□□ 0.51
CDH3-205ENST00000566808 ZNF423Q2M1K9 1284 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 MGAT5BQ3V5L5 792 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 C19orf48Q6RUI8 117 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 RIN3Q8TB24 985 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 UBQLN1Q9UMX0 589 aaKnown RBP18.25■□□□□ 0.51
CDH3-205ENST00000566808 CEP192Q8TEP8 1941 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 NAV2Q8IVL1 2488 aa18.25■□□□□ 0.51
CDH3-205ENST00000566808 PCDH15Q96QU1 1955 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 TNFRSF10BO14763 440 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 TOM1L1O75674 476 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 SEC24BO95487 1268 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 CXCL8P10145 99 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 CYP3A5P20815 502 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 COL28A1Q2UY09 1125 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 LPCAT2Q7L5N7 544 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 RAB44Q7Z6P3 723 aaPredicted RBP18.24■□□□□ 0.51
CDH3-205ENST00000566808 SYT12Q8IV01 421 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 MAB21L3Q8N8X9 362 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 MDGA1Q8NFP4 955 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 OR10T2Q8NGX3 314 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 ATP2A3Q93084 1043 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 SPACA7Q96KW9 195 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 ECT2Q9H8V3 914 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 KMT5AQ9NQR1 393 aa18.24■□□□□ 0.51
CDH3-205ENST00000566808 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
CDH3-205ENST00000566808 XPOTO43592 962 aaKnown RBP18.23■□□□□ 0.51
CDH3-205ENST00000566808 HOXD12P35452 270 aa18.23■□□□□ 0.51
CDH3-205ENST00000566808 NLRP12P59046 1061 aa18.23■□□□□ 0.51
CDH3-205ENST00000566808 MTF1Q14872 753 aa18.23■□□□□ 0.51
CDH3-205ENST00000566808 SLC39A12Q504Y0 691 aa18.23■□□□□ 0.51
CDH3-205ENST00000566808 LMBRD2Q68DH5 695 aaPredicted RBP18.23■□□□□ 0.51
CDH3-205ENST00000566808 TMEM150AQ86TG1 271 aa18.23■□□□□ 0.51
CDH3-205ENST00000566808 TMEM130Q8N3G9 435 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms