RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 MPZL3Q6UWV2 235 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 CATSPERGQ6ZRH7 1159 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 PDZD4Q76G19 769 aaPredicted RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 PARP9Q8IXQ6 854 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 MREGQ8N565 214 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 FAM53CQ9NYF3 392 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 DNPEPQ9ULA0 475 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 PIN4Q9Y237 131 aaKnown RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 DCDC2CA8MYV0 355 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 PIAS1O75925 651 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 HNRNPH1P31943 449 aaKnown RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 NOVP48745 357 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 CCNG2Q16589 344 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 DSTYKQ6XUX3 929 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 ARHGAP24Q8N264 748 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 EXD1Q8NHP7 514 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 TRPM4Q8TD43 1214 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 SCYL1Q96KG9 808 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 SERPINB12Q96P63 405 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 NT5C1AQ9BXI3 368 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 GCOM2Q9BZD3 368 aaPredicted RBP12.18□□□□□ -0.46
CDH1-210ENST00000566612 SPC25Q9HBM1 224 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 KLK14Q9P0G3 267 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 WDR35Q9P2L0 1181 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 ARL2BPQ9Y2Y0 163 aa12.18□□□□□ -0.46
CDH1-210ENST00000566612 TUBGCP6Q96RT7 1819 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 PLA2G6O60733 806 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 STAMBPO95630 424 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 SLC25A27O95847 323 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 STAG3L1P0CL83 205 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 RARBP10826 455 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 ADSSP30520 456 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 SESN2P58004 480 aaPredicted RBP12.17□□□□□ -0.46
CDH1-210ENST00000566612 TFDP3Q5H9I0 405 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 DLK2Q6UY11 383 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 SPOCD1Q6ZMY3 1216 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 RAPH1Q70E73 1250 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 TRIM55Q9BYV6 548 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 ETS1P14921 441 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 VGLL4Q14135 290 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 MUM1Q2TAK8 710 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 ZACNQ401N2 412 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 HEATR6Q6AI08 1181 aaKnown RBP12.17□□□□□ -0.46
CDH1-210ENST00000566612 MOB2Q70IA6 237 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 ARMCX2Q7L311 632 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 ACOT1Q86TX2 421 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 CEP120Q8N960 986 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 KCNV2Q8TDN2 545 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 NAALADL1Q9UQQ1 740 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 CFAP69A5D8W1 941 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 EIF4E1BA6NMX2 242 aaKnown RBP12.17□□□□□ -0.46
CDH1-210ENST00000566612 CYP1A2P05177 515 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 ESRRAP11474 423 aaPredicted RBP12.17□□□□□ -0.46
CDH1-210ENST00000566612 INSRRP14616 1297 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 SLC12A2P55011 1212 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 AP1B1Q10567 949 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 GJC2Q5T442 439 aaPredicted RBP12.17□□□□□ -0.46
CDH1-210ENST00000566612 NXNQ6DKJ4 435 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
CDH1-210ENST00000566612 FAM129AQ9BZQ8 928 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 SLC40A1Q9NP59 571 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 NPHS2Q9NP85 383 aa12.17□□□□□ -0.46
CDH1-210ENST00000566612 PPARGC1AQ9UBK2 798 aaKnown RBP12.17□□□□□ -0.46
CDH1-210ENST00000566612 TOGARAM1Q9Y4F4 1720 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
CDH1-210ENST00000566612 LYPLA2O95372 231 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 TSNAXIP1Q2TAA8 658 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 WDR49Q8IV35 697 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 HELQQ8TDG4 1101 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 ATXN7L3BQ96GX2 97 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 CYTH2Q99418 400 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 KLHL8Q9P2G9 620 aaPredicted RBP12.16□□□□□ -0.46
CDH1-210ENST00000566612 APOL1O14791 398 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 GH1P01241 217 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 KRT4P19013 534 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 GCLCP48506 637 aaPredicted RBP12.16□□□□□ -0.46
CDH1-210ENST00000566612 C1QBPQ07021 282 aaKnown RBP12.16□□□□□ -0.46
CDH1-210ENST00000566612 RASGEF1CQ8N431 466 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 AFG1LQ8WV93 481 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 AGAP3Q96P47 875 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 INPP5FQ9Y2H2 1132 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 IRF6O14896 467 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 ASAP2O43150 1006 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 NPTXRO95502 500 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 ZNF286BP0CG31 522 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 OAZ1P54368 228 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 MAMLD1Q13495 774 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 CAPSQ13938 189 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 RWDD4Q6NW29 188 aaKnown RBP12.16□□□□□ -0.46
CDH1-210ENST00000566612 CD302Q8IX05 232 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 MTFR1LQ9H019 292 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 ASCC2Q9H1I8 757 aaPredicted RBP12.16□□□□□ -0.46
CDH1-210ENST00000566612 ZFP69BQ9UJL9 534 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 ATRNL1Q5VV63 1379 aa12.16□□□□□ -0.46
CDH1-210ENST00000566612 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms