RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PLXNA3P51805 1871 aa12.27□□□□□ -0.44
KARS-207ENST00000566560 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 H7C4K7 107 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 TACC1O75410 805 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 SLC9A1P19634 815 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 TBXAS1P24557 533 aaPredicted RBP12.27□□□□□ -0.45
KARS-207ENST00000566560 PON1P27169 355 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 UBASH3AP57075 661 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 SYCP1Q15431 976 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 CTXN3Q4LDR2 81 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 PDE12Q6L8Q7 609 aaKnown RBP12.27□□□□□ -0.45
KARS-207ENST00000566560 DPH6Q7L8W6 267 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 LAPTM4BQ86VI4 370 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 OSTM1Q86WC4 334 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 ARHGEF19Q8IW93 802 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 GPR65Q8IYL9 337 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 PPM1KQ8N3J5 372 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 KBTBD7Q8WVZ9 684 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 FAXDC2Q96IV6 333 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 PCMTD1Q96MG8 357 aaPredicted RBP12.27□□□□□ -0.45
KARS-207ENST00000566560 GAS2L1Q99501 681 aaPredicted RBP12.27□□□□□ -0.45
KARS-207ENST00000566560 MRPL45Q9BRJ2 306 aaKnown RBP12.27□□□□□ -0.45
KARS-207ENST00000566560 BCO2Q9BYV7 579 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 SDCBP2Q9H190 292 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.27□□□□□ -0.45
KARS-207ENST00000566560 IFNKQ9P0W0 207 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 APEX2Q9UBZ4 518 aa12.27□□□□□ -0.45
KARS-207ENST00000566560 CDH23Q9H251 3354 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 C2orf71A6NGG8 1288 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 HIDE1A8MVS5 230 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 OAZ2O95190 189 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 TPM3P06753 285 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 WEE2P0C1S8 567 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 RPL17P18621 184 aaKnown RBP12.26□□□□□ -0.45
KARS-207ENST00000566560 CD58P19256 250 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 WARSP23381 471 aaKnown RBP12.26□□□□□ -0.45
KARS-207ENST00000566560 LHX1P48742 406 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 NDUFV1P49821 464 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 KLK7P49862 253 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 YWHAEP62258 255 aaKnown RBP12.26□□□□□ -0.45
KARS-207ENST00000566560 APBA1Q02410 837 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 KIAA0319Q5VV43 1072 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 LIMS2Q7Z4I7 341 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 GLYCTKQ8IVS8 523 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 THEM5Q8N1Q8 247 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 DEFB123Q8N688 67 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 OR6B3Q8NGW1 331 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 OR10T2Q8NGX3 314 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 LNX1Q8TBB1 728 aaPredicted RBP12.26□□□□□ -0.45
KARS-207ENST00000566560 PPP2R3CQ969Q6 453 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 NAP1L5Q96NT1 182 aaPredicted RBP12.26□□□□□ -0.45
KARS-207ENST00000566560 ERGIC2Q96RQ1 377 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 EMILIN2Q9BXX0 1053 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 SNX25Q9H3E2 840 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 CYP3A43Q9HB55 503 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 SIX2Q9NPC8 291 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 DDX43Q9NXZ2 648 aaKnown RBP12.26□□□□□ -0.45
KARS-207ENST00000566560 FBXL5Q9UKA1 691 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 SIK3Q9Y2K2 1263 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 BACE2Q9Y5Z0 518 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 IRAK3Q9Y616 596 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 CDY1Q9Y6F8 540 aa12.26□□□□□ -0.45
KARS-207ENST00000566560 OR6C75A6NL08 312 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 TEX28O15482 410 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 TEX33O43247 280 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 CBFA2T2O43439 604 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 HCRTO43612 131 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 LILRB3O75022 631 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 CXCL14O95715 111 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 ADH1AP07327 375 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 CPB1P15086 417 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 RFX1P22670 979 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 IGFBP4P22692 258 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 ACAT1P24752 427 aaKnown RBP12.25□□□□□ -0.45
KARS-207ENST00000566560 PCSK1P29120 753 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 CLCN1P35523 988 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 CDH8P55286 799 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 TSPY1Q01534 308 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 GCNT1Q02742 428 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 INCA1Q0VD86 236 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 KCNMA1Q12791 1236 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 MRPL58Q14197 206 aaKnown RBP12.25□□□□□ -0.45
KARS-207ENST00000566560 ADGRE1Q14246 886 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 PTPN21Q16825 1174 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 PHLDB3Q6NSJ2 640 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 GJB7Q6PEY0 223 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 RRAGAQ7L523 313 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 MRPL43Q8N983 215 aaKnown RBP12.25□□□□□ -0.45
KARS-207ENST00000566560 KAT5Q92993 513 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 FAM81BQ96LP2 452 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 RTP3Q9BQQ7 232 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 SYT15Q9BQS2 421 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 OXCT2Q9BYC2 517 aaPredicted RBP12.25□□□□□ -0.45
KARS-207ENST00000566560 XPO4Q9C0E2 1151 aaKnown RBP12.25□□□□□ -0.45
KARS-207ENST00000566560 NSUN3Q9H649 340 aaKnown RBP12.25□□□□□ -0.45
KARS-207ENST00000566560 FAM207AQ9NSI2 230 aaPredicted RBP12.25□□□□□ -0.45
KARS-207ENST00000566560 HMGXB4Q9UGU5 601 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 PTPRDP23468 1912 aa12.25□□□□□ -0.45
KARS-207ENST00000566560 A0A1W2PQC6 194 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms