RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 RBBP8NLQ8NC74 664 aaPredicted RBP17.89■□□□□ 0.45
RAB40C-210ENST00000566290 HLA-CQ95604 372 aa17.89■□□□□ 0.45
RAB40C-210ENST00000566290 ARHGEF26Q96DR7 871 aa17.89■□□□□ 0.45
RAB40C-210ENST00000566290 PCDHGC3Q9UN70 934 aa17.89■□□□□ 0.45
RAB40C-210ENST00000566290 SLC4A7Q9Y6M7 1214 aa17.89■□□□□ 0.45
RAB40C-210ENST00000566290 SRGAP2O75044 1071 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 CLSTN1O94985 981 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 CXCL8P10145 99 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 TNFRSF8P28908 595 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 NHLH1Q02575 133 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 C1QBPQ07021 282 aaKnown RBP17.88■□□□□ 0.45
RAB40C-210ENST00000566290 ZNF699Q32M78 642 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 NOTUMQ6P988 496 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 DAAM2Q86T65 1068 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 ARID3AQ99856 593 aa17.88■□□□□ 0.45
RAB40C-210ENST00000566290 CCDC94Q9BW85 323 aaPredicted RBP17.88■□□□□ 0.45
RAB40C-210ENST00000566290 SEPT11Q9NVA2 429 aaKnown RBP17.88■□□□□ 0.45
RAB40C-210ENST00000566290 PDCD11Q14690 1871 aaKnown RBP17.87■□□□□ 0.45
RAB40C-210ENST00000566290 CCDC188H7C350 402 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 TULP1O00294 542 aaPredicted RBP17.87■□□□□ 0.45
RAB40C-210ENST00000566290 ZNF185O15231 689 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 NCK2O43639 380 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 PAEPP09466 180 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 CTSHP09668 335 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 P4HA1P13674 534 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 EIF4BP23588 611 aaKnown RBP17.87■□□□□ 0.45
RAB40C-210ENST00000566290 RFC2P35250 354 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 ASPAP45381 313 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 CRYBB1P53674 252 aaPredicted RBP17.87■□□□□ 0.45
RAB40C-210ENST00000566290 MYL6P60660 151 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 NOMO3P69849 1222 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 PPP2R5EQ16537 467 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 SLC10A6Q3KNW5 377 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 SEZ6Q53EL9 994 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 TMCO3Q6UWJ1 677 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 MON1BQ7L1V2 547 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 CEP120Q8N960 986 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 C1orf127Q8N9H9 656 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 EIF1ADQ8N9N8 165 aaKnown RBP17.87■□□□□ 0.45
RAB40C-210ENST00000566290 ACAP3Q96P50 834 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 OSGEPQ9NPF4 335 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 SIX4Q9UIU6 781 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 PCDHB4Q9Y5E5 795 aa17.87■□□□□ 0.45
RAB40C-210ENST00000566290 LACTBL1A8MY62 500 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 PGRMC1O00264 195 aaKnown RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 MEFVO15553 781 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 CST3P01034 146 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 CXCL10P02778 98 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 CA3P07451 260 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 ABCB4P21439 1286 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 CTNNA2P26232 953 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 GNA15P30679 374 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 HOXA11P31270 313 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 GSCP56915 257 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 TFAMQ00059 246 aaKnown RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 TMEM132DQ14C87 1099 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 SPOPLQ6IQ16 392 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 CC2D1AQ6P1N0 951 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 TMEM270Q6UE05 265 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 MCOLN2Q8IZK6 566 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.86■□□□□ 0.457e-7■■■■■ 86.8
RAB40C-210ENST00000566290 SCLT1Q96NL6 688 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 NAP1L3Q99457 506 aaPredicted RBP17.86■□□□□ 0.45
RAB40C-210ENST00000566290 ARFGAP3Q9NP61 516 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 FAM53CQ9NYF3 392 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 CTTNBP2NLQ9P2B4 639 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 SCINQ9Y6U3 715 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 CITO14578 2027 aa17.86■□□□□ 0.45
RAB40C-210ENST00000566290 ZBBXA8MT70 800 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 DDX3YO15523 660 aaKnown RBP17.85■□□□□ 0.45
RAB40C-210ENST00000566290 PFKMP08237 780 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 NFICP08651 508 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 ATP2A2P16615 1042 aaKnown RBP17.85■□□□□ 0.45
RAB40C-210ENST00000566290 SLC1A1P43005 524 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 NSFP46459 744 aaKnown RBP17.85■□□□□ 0.45
RAB40C-210ENST00000566290 TNNC1P63316 161 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 INCA1Q0VD86 236 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 MAP9Q49MG5 647 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 XKR4Q5GH76 650 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 ZNF667Q5HYK9 610 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 TAF3Q5VWG9 929 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 ZNF564Q8TBZ8 553 aaPredicted RBP17.85■□□□□ 0.45
RAB40C-210ENST00000566290 CD101Q93033 1021 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 ZNF653Q96CK0 615 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 CAPZA3Q96KX2 299 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 CISHQ9NSE2 258 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 CNTN3Q9P232 1028 aa17.85■□□□□ 0.45
RAB40C-210ENST00000566290 CCDC66A2RUB6 948 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 ARHGEF15O94989 841 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 MAN1A1P33908 653 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 PTP4A2Q12974 167 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 ZBTB6Q15916 424 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 LIN9Q5TKA1 542 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 JADE1Q6IE81 842 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 PLEKHA7Q6IQ23 1121 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 CATSPER4Q7RTX7 472 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 TMCO2Q7Z6W1 182 aaPredicted RBP17.84■□□□□ 0.45
RAB40C-210ENST00000566290 LRRC52Q8N7C0 313 aa17.84■□□□□ 0.45
RAB40C-210ENST00000566290 UBL4BQ8N7F7 174 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms