RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 PCDHA12Q9UN75 941 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 SNX14Q9Y5W7 946 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 SPAG17Q6Q759 2223 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 USP24Q9UPU5 2620 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 KIAA0391O15091 583 aaKnown RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 YKT6O15498 198 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 B4GALT5O43286 388 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 NTRK1P04629 796 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 CD59P13987 128 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 HNRNPLP14866 589 aaKnown RBP eCLIP6.67□□□□□ -1.345e-11■■■□□ 15.8
UBE3A-205ENST00000566215 HMGA1P17096 107 aaKnown RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 AKAP5P24588 427 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 PSEN1P49768 467 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 YWHAHQ04917 246 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 FAM160A1Q05DH4 1040 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 VEPH1Q14D04 833 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 TXNDC11Q6PKC3 985 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 ARID3BQ8IVW6 561 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 IGSF22Q8N9C0 903 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 ZNF419Q96HQ0 510 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 CYP4F11Q9HBI6 524 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 GDAP2Q9NXN4 497 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 IL37Q9NZH6 218 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 TJP2Q9UDY2 1190 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 ODF2LQ9ULJ1 636 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 APOBEC2Q9Y235 224 aaKnown RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 CACNA1HO95180 2353 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 DCHS1Q96JQ0 3298 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 B3GAT3O94766 335 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 MLLT3P42568 568 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 ZNF131P52739 623 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 MCCD1P59942 119 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 SOX4Q06945 474 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 DMC1Q14565 340 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 ANKRD1Q15327 319 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 NFE2Q16621 373 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 RNF19BQ6ZMZ0 732 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 DNAJB7Q7Z6W7 309 aaPredicted RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 DCP1BQ8IZD4 617 aaKnown RBP6.67□□□□□ -1.34
UBE3A-205ENST00000566215 ADAM32Q8TC27 787 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 KIF2CQ99661 725 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 SCNM1Q9BWG6 230 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 BRMS1Q9HCU9 246 aa6.67□□□□□ -1.34
UBE3A-205ENST00000566215 AP5Z1O43299 807 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 SPATA31D3P0C874 917 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 KRT2P35908 639 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 RPL10AP62906 217 aaKnown RBP6.66□□□□□ -1.34
UBE3A-205ENST00000566215 CAMK2BQ13554 666 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 GRM2Q14416 872 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 RTP5Q14D33 572 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 PON2Q15165 354 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 SPATA31D4Q6ZUB0 917 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 RASEFQ8IZ41 740 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 ENGASEQ8NFI3 743 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 DEPTORQ8TB45 409 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 FAM200AQ8TCP9 573 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 EZH1Q92800 747 aaPredicted RBP6.66□□□□□ -1.34
UBE3A-205ENST00000566215 LRRC3BQ96PB8 259 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 VPS54Q9P1Q0 977 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 NDRG2Q9UN36 371 aaKnown RBP6.66□□□□□ -1.34
UBE3A-205ENST00000566215 CASTOR2A6NHX0 329 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 K7EQS6 105 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 EDN1P05305 212 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 CCDC192P0DO97 292 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 RXRAP19793 462 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 MARCKSP29966 332 aaPredicted RBP6.66□□□□□ -1.34
UBE3A-205ENST00000566215 GJA4P35212 333 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 NOP14P78316 857 aaKnown RBP6.66□□□□□ -1.34
UBE3A-205ENST00000566215 C19orf57Q0VDD7 668 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 SMAD1Q15797 465 aaKnown RBP6.66□□□□□ -1.34
UBE3A-205ENST00000566215 CALCRLQ16602 461 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 ADCK5Q3MIX3 580 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 TOGARAM2Q6ZUX3 1019 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 TAS1R3Q7RTX0 852 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 HS6ST3Q8IZP7 471 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 LRRC52Q8N7C0 313 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 ACBD6Q9BR61 282 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 ECT2Q9H8V3 914 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 POLMQ9NP87 494 aaPredicted RBP6.66□□□□□ -1.34
UBE3A-205ENST00000566215 TDP1Q9NUW8 608 aa6.66□□□□□ -1.34
UBE3A-205ENST00000566215 hCG_1642624A0A1W2PR95 340 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 FAM92AA1XBS5 289 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 C4orf47A7E2U8 309 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 CHMP2AO43633 222 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 CSDE1O75534 798 aaKnown RBP6.65□□□□□ -1.34
UBE3A-205ENST00000566215 OXTRP30559 389 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 FGD1P98174 961 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 ENPEPQ07075 957 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 MAPK7Q13164 816 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 CATSPER3Q86XQ3 398 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 POTEDQ86YR6 584 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 BSNDQ8WZ55 320 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 FOXJ1Q92949 421 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 USP13Q92995 863 aaPredicted RBP6.65□□□□□ -1.34
UBE3A-205ENST00000566215 GRAMD1AQ96CP6 724 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 SLC26A6Q9BXS9 759 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 FOXP1Q9H334 677 aaPredicted RBP6.65□□□□□ -1.34
UBE3A-205ENST00000566215 TBC1D7Q9P0N9 293 aa6.65□□□□□ -1.34
UBE3A-205ENST00000566215 HES2Q9Y543 173 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms