RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PSMC3P17980 439 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 MLLT6P55198 1093 aaPredicted RBP17.97■□□□□ 0.47
USB1-211ENST00000565662 CYP24A1Q07973 514 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 CUL4BQ13620 913 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 MLF2Q15773 248 aaPredicted RBP17.97■□□□□ 0.47
USB1-211ENST00000565662 CFAP221Q4G0U5 840 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 CBWD2Q8IUF1 395 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 ADGRF2Q8IZF7 708 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 PDCL2Q8N4E4 241 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 OR10T2Q8NGX3 314 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 FAM200AQ8TCP9 573 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 SYAP1Q96A49 352 aaPredicted RBP17.97■□□□□ 0.47
USB1-211ENST00000565662 MCRS1Q96EZ8 462 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 PAGE5Q96GU1 130 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 HPDLQ96IR7 371 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 SEPT5Q99719 369 aaPredicted RBP17.97■□□□□ 0.47
USB1-211ENST00000565662 TRMT61BQ9BVS5 477 aaKnown RBP17.97■□□□□ 0.47
USB1-211ENST00000565662 BLZF1Q9H2G9 400 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 SMOC2Q9H3U7 446 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 DDX43Q9NXZ2 648 aaKnown RBP17.97■□□□□ 0.47
USB1-211ENST00000565662 HOOK1Q9UJC3 728 aaKnown RBP17.97■□□□□ 0.47
USB1-211ENST00000565662 CA14Q9ULX7 337 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 SNX9Q9Y5X1 595 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 GOLGA6L4A6NEF3 574 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 MAN2B1O00754 1011 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 CALUO43852 315 aaPredicted RBP17.96■□□□□ 0.47
USB1-211ENST00000565662 PDGFBP01127 241 aaPredicted RBP17.96■□□□□ 0.47
USB1-211ENST00000565662 OR4Q2P0C623 313 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 ENPEPQ07075 957 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 TRPC3Q13507 836 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 INTS6LQ5JSJ4 861 aaKnown RBP17.96■□□□□ 0.47
USB1-211ENST00000565662 TMC8Q8IU68 726 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 NELFCDQ8IXH7 590 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 TMEM105Q8N8V8 129 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 ATAD1Q8NBU5 361 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 DNAI2Q9GZS0 605 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 IKZF4Q9H2S9 585 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 SLC39A2Q9NP94 309 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 CDH9Q9ULB4 789 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 L1RE1Q9UN81 338 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 SIT1Q9Y3P8 196 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 MIA3Q5JRA6 1907 aa17.96■□□□□ 0.47
USB1-211ENST00000565662 PIEZO1Q92508 2521 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 A0A1B0GVL5 298 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 KANSL1LA0AUZ9 987 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 KRBA1A5PL33 1030 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 TULP1O00294 542 aaPredicted RBP17.95■□□□□ 0.46
USB1-211ENST00000565662 DPYSL4O14531 572 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 GABRDO14764 452 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 MAPK13O15264 365 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 DLATP10515 647 aaKnown RBP17.95■□□□□ 0.46
USB1-211ENST00000565662 HAPLN1P10915 354 aaPredicted RBP17.95■□□□□ 0.46
USB1-211ENST00000565662 P4HA1P13674 534 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 NPR3P17342 541 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 PDE6CP51160 858 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 CYP2J2P51589 502 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 TNNC1P63316 161 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 GPC5P78333 572 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 PLCB2Q00722 1185 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 TCF15Q12870 199 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 KCNB1Q14721 858 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 TRAPPC11Q7Z392 1133 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 DNAJB7Q7Z6W7 309 aaPredicted RBP17.95■□□□□ 0.46
USB1-211ENST00000565662 YAF2Q8IY57 180 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 PJA1Q8NG27 643 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 ZSCAN18Q8TBC5 510 aaPredicted RBP17.95■□□□□ 0.46
USB1-211ENST00000565662 KXD1Q9BQD3 176 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 DDX23Q9BUQ8 820 aaKnown RBP17.95■□□□□ 0.46
USB1-211ENST00000565662 DNAJC25Q9H1X3 360 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 BRD9Q9H8M2 597 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 KIF9Q9HAQ2 790 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 RMND1Q9NWS8 449 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 ABI2Q9NYB9 513 aaPredicted RBP17.95■□□□□ 0.46
USB1-211ENST00000565662 FRMD4BQ9Y2L6 1034 aa17.95■□□□□ 0.46
USB1-211ENST00000565662 TACC1O75410 805 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 RHOBTB3O94955 611 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 RPN1P04843 607 aaKnown RBP17.94■□□□□ 0.46
USB1-211ENST00000565662 RPL13P26373 211 aaKnown RBP17.94■□□□□ 0.46
USB1-211ENST00000565662 HOXD13P35453 343 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 MAGEA11P43364 429 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 NFIL3Q16649 462 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 KMT5BQ4FZB7 885 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 SLC44A4Q53GD3 710 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 FAM78AQ5JUQ0 283 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 IER5LQ5T953 404 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 ZC3H14Q6PJT7 736 aaKnown RBP17.94■□□□□ 0.46
USB1-211ENST00000565662 VSTM1Q6UX27 236 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 ZNF852Q6ZMS4 543 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 SPATA2LQ8IUW3 424 aaPredicted RBP17.94■□□□□ 0.46
USB1-211ENST00000565662 MFSD6LQ8IWD5 586 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 FSIP1Q8NA03 581 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 DTWD2Q8NBA8 298 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 GLIS3Q8NEA6 775 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 CXorf38Q8TB03 319 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 ATOH1Q92858 354 aaPredicted RBP17.94■□□□□ 0.46
USB1-211ENST00000565662 HPS3Q969F9 1004 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 TRMT2BQ96GJ1 504 aaKnown RBP17.94■□□□□ 0.46
USB1-211ENST00000565662 BCO2Q9BYV7 579 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 ATXN3LQ9H3M9 355 aa17.94■□□□□ 0.46
USB1-211ENST00000565662 SEMA4AQ9H3S1 761 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms