RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 KLHL11Q9NVR0 708 aa5.5□□□□□ -1.53
CHD9-215ENST00000565442 RLIMQ9NVW2 624 aa5.5□□□□□ -1.53
CHD9-215ENST00000565442 STK32BQ9NY57 414 aa5.5□□□□□ -1.53
CHD9-215ENST00000565442 CENPVL1A0A0U1RR11 272 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 ISM1B1AKI9 464 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 BTN3A1O00481 513 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 SCAF4O95104 1147 aaKnown RBP5.49□□□□□ -1.53
CHD9-215ENST00000565442 ZKSCAN1P17029 563 aaPredicted RBP5.49□□□□□ -1.53
CHD9-215ENST00000565442 EN2P19622 333 aaPredicted RBP5.49□□□□□ -1.53
CHD9-215ENST00000565442 APOBEC3AP31941 199 aaPredicted RBP5.49□□□□□ -1.53
CHD9-215ENST00000565442 ZEB1P37275 1124 aaPredicted RBP5.49□□□□□ -1.53
CHD9-215ENST00000565442 ALDH5A1P51649 535 aaPredicted RBP5.49□□□□□ -1.53
CHD9-215ENST00000565442 ZNF135P52742 658 aaPredicted RBP5.49□□□□□ -1.53
CHD9-215ENST00000565442 HABP2Q14520 560 aaPredicted RBP5.49□□□□□ -1.53
CHD9-215ENST00000565442 C3orf38Q5JPI3 329 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 FBXO42Q6P3S6 717 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 USP37Q86T82 979 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 SRLQ86TD4 932 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 SESTD1Q86VW0 696 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 PDSS2Q86YH6 399 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 KBTBD7Q8WVZ9 684 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 NEU1Q99519 415 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 TLR10Q9BXR5 811 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 FNIP2Q9P278 1114 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 AGAP1Q9UPQ3 857 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 MED16Q9Y2X0 877 aa5.49□□□□□ -1.53
CHD9-215ENST00000565442 TBC1D4O60343 1298 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 UNC5CO95185 931 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 ANXA1P04083 346 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 CKBP12277 381 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 SERPINB3P29508 390 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 ARFIP2P53365 341 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 TSHZ3Q63HK5 1081 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 ZNF783Q6ZMS7 281 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 MORC1Q86VD1 984 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 SKAP1Q86WV1 359 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 PDPRQ8NCN5 879 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 OR6B3Q8NGW1 331 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 SCAMP4Q969E2 229 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 MYEOVQ96EZ4 313 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 MARS2Q96GW9 593 aaKnown RBP5.48□□□□□ -1.53
CHD9-215ENST00000565442 SUCLG2Q96I99 432 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 MYD88Q99836 296 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 TINAGL1Q9GZM7 467 aaPredicted RBP5.48□□□□□ -1.53
CHD9-215ENST00000565442 BTBD1Q9H0C5 482 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 SERHL2Q9H4I8 314 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 ZNF768Q9H5H4 540 aaKnown RBP5.48□□□□□ -1.53
CHD9-215ENST00000565442 GPR35Q9HC97 309 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 MRPS18AQ9NVS2 196 aaKnown RBP5.48□□□□□ -1.53
CHD9-215ENST00000565442 CDYLQ9Y232 598 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 DAAM1Q9Y4D1 1078 aa5.48□□□□□ -1.53
CHD9-215ENST00000565442 USP15Q9Y4E8 981 aaPredicted RBP5.48□□□□□ -1.53
CHD9-215ENST00000565442 E9PLN8 166 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 F8W8V4 182 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 M0QYG6 137 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 LPXNO60711 386 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 DNAJB5O75953 348 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 FCER1AP12319 257 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 RNASE9P60153 205 aaKnown RBP5.47□□□□□ -1.53
CHD9-215ENST00000565442 SLFN5Q08AF3 891 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 SLC13A2Q13183 592 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 FAM102AQ5T9C2 384 aaPredicted RBP5.47□□□□□ -1.53
CHD9-215ENST00000565442 METRNLQ641Q3 311 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 LIX1LQ8IVB5 337 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 FAM186BQ8IYM0 893 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 NSUN7Q8NE18 718 aaKnown RBP5.47□□□□□ -1.53
CHD9-215ENST00000565442 MAML1Q92585 1016 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 GJA10Q969M2 543 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 CCDC138Q96M89 665 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 VKORC1Q9BQB6 163 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 NLRC4Q9NPP4 1024 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 AFF4Q9UHB7 1163 aaKnown RBP5.47□□□□□ -1.53
CHD9-215ENST00000565442 EIF2B4Q9UI10 523 aaKnown RBP5.47□□□□□ -1.53
CHD9-215ENST00000565442 INSL6Q9Y581 213 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 COMMD10Q9Y6G5 202 aa5.47□□□□□ -1.53
CHD9-215ENST00000565442 ARID4BQ4LE39 1312 aaPredicted RBP5.47□□□□□ -1.53
CHD9-215ENST00000565442 AATKQ6ZMQ8 1374 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 CCDC78A2IDD5 438 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 POM121BA6NF01 834 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 PROB1E7EW31 1015 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 ZNF185O15231 689 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 VPS4BO75351 444 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 KIF20AO95235 890 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 GRPP07492 148 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 TYRP1P17643 537 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 RPL17P18621 184 aaKnown RBP5.46□□□□□ -1.54
CHD9-215ENST00000565442 GCSHP23434 173 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 TM4SF4P48230 202 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 CASP5P51878 434 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 UCP3P55916 312 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 RPS16P62249 146 aaKnown RBP5.46□□□□□ -1.54
CHD9-215ENST00000565442 ZNF543Q08ER8 600 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 CTBP1Q13363 440 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 AGAP9Q5VTM2 703 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 XRRA1Q6P2D8 792 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 MPP5Q8N3R9 675 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 CCDC33Q8N5R6 958 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 FAM46DQ8NEK8 389 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 NUP133Q8WUM0 1156 aa5.46□□□□□ -1.54
CHD9-215ENST00000565442 NELL1Q92832 810 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms