RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 HAPLN1P10915 354 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 HOXC13P31276 330 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 CTHP32929 405 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 CXCL12P48061 93 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 CCR3P51677 355 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 CASP5P51878 434 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 KPNA1P52294 538 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 CYP4F8P98187 520 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 TNK2Q07912 1038 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 SMARCB1Q12824 385 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 RESTQ13127 1097 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 CCINQ13939 588 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 PPP2R5DQ14738 602 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 POSTNQ15063 836 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 MGAT5BQ3V5L5 792 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 ARHGAP29Q52LW3 1261 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 L1TD1Q5T7N2 865 aaKnown RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 RRAGBQ5VZM2 374 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 C1orf228Q6PIY5 440 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 Q6ZS52 159 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 SV2BQ7L1I2 683 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 RALGPS2Q86X27 583 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 METTL23Q86XA0 190 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 NT5DC4Q86YG4 428 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 YAF2Q8IY57 180 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 THEM5Q8N1Q8 247 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 SPEM1Q8N4L4 309 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 CELF5Q8N6W0 485 aaKnown RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 TTC8Q8TAM2 541 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 SPPL2BQ8TCT7 592 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 GIPC2Q8TF65 315 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 C2orf15Q8WU43 125 aaKnown RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 CHFRQ96EP1 664 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 PKMYT1Q99640 499 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 FAM83CQ9BQN1 747 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 FAM213AQ9BRX8 229 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 FGFBP2Q9BYJ0 223 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 SMG9Q9H0W8 520 aaKnown RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 MRPL44Q9H9J2 332 aaKnown RBP9.26□□□□□ -0.93
CAPN3-213ENST00000565173 PARD6AQ9NPB6 346 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 OLFML3Q9NRN5 406 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 TBC1D7Q9P0N9 293 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 NCOR2Q9Y618 2525 aa9.26□□□□□ -0.93
CAPN3-213ENST00000565173 NUP210Q8TEM1 1887 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-213ENST00000565173 OTOL1A6NHN0 477 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-213ENST00000565173 GAP43P17677 238 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 SYT1P21579 422 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 CDC25CP30307 473 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 ATXN1P54253 815 aaKnown RBP9.25□□□□□ -0.93
CAPN3-213ENST00000565173 NLRP12P59046 1061 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 VEPH1Q14D04 833 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 PON2Q15165 354 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 SV2CQ496J9 727 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 ARHGAP15Q53QZ3 475 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 BRSK2Q8IWQ3 736 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 CMTM8Q8IZV2 173 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 PDCL2Q8N4E4 241 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 C1orf127Q8N9H9 656 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 RIN3Q8TB24 985 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 BPIFB1Q8TDL5 484 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 SAAL1Q96ER3 474 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 FAM84AQ96KN4 292 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 ACCSQ96QU6 501 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 PANK2Q9BZ23 570 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 UPF2Q9HAU5 1272 aaKnown RBP9.25□□□□□ -0.93
CAPN3-213ENST00000565173 ABI2Q9NYB9 513 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-213ENST00000565173 CCDC39Q9UFE4 941 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 SIX4Q9UIU6 781 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 AGAP1Q9UPQ3 857 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 CCL26Q9Y258 94 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 PCDHB13Q9Y5F0 798 aa9.25□□□□□ -0.93
CAPN3-213ENST00000565173 MORC2Q9Y6X9 1032 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-213ENST00000565173 CHURC1-FNTBB4DL54 471 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 DPYSL4O14531 572 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 GABRDO14764 452 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 GCNT3O95395 438 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 ITGB3P05106 788 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 PDCP20941 246 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 GARTP22102 1010 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 POLR2BP30876 1174 aaKnown RBP9.24□□□□□ -0.93
CAPN3-213ENST00000565173 HOXA6P31267 233 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 PNPLA4P41247 253 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 FNTBP49356 437 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 GPR15P49685 360 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 TFAMQ00059 246 aaKnown RBP9.24□□□□□ -0.93
CAPN3-213ENST00000565173 PLCB2Q00722 1185 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 CEBPZQ03701 1054 aaKnown RBP9.24□□□□□ -0.93
CAPN3-213ENST00000565173 SRSF5Q13243 272 aaKnown RBP9.24□□□□□ -0.93
CAPN3-213ENST00000565173 LRRC32Q14392 662 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 SLC39A14Q15043 492 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 LPAL2Q16609 132 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 CCDC142Q17RM4 750 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 DGKKQ5KSL6 1271 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 SDHAF4Q5VUM1 108 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 TXNDC8Q6A555 127 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 LAIR1Q6GTX8 287 aa9.24□□□□□ -0.93
CAPN3-213ENST00000565173 DCP1BQ8IZD4 617 aaKnown RBP9.24□□□□□ -0.93
CAPN3-213ENST00000565173 SYNPOQ8N3V7 929 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms