RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 KIAA0895Q8NCT3 520 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 STKLD1Q8NE28 680 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 HPDLQ96IR7 371 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 ZSWIM3Q96MP5 696 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 KCNH6Q9H252 994 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 TBC1D17Q9HA65 648 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 KIAA1586Q9HCI6 787 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 ZNF334Q9HCZ1 680 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 AVENQ9NQS1 362 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 ARHGEF3Q9NR81 526 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 TMLHEQ9NVH6 421 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 DDX43Q9NXZ2 648 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 WNT16Q9UBV4 365 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 MAFFQ9ULX9 164 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 ZNF638Q14966 1978 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 H0Y858 1186 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 GADD45BO75293 160 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 MOSPD3O75425 235 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 RPN1P04843 607 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 CASP4P49662 377 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 GPR15P49685 360 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 PTPN5P54829 565 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 MYL7Q01449 175 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 FAM160A1Q05DH4 1040 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 CYP24A1Q07973 514 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 TCF15Q12870 199 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 MYO1EQ12965 1108 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 VEPH1Q14D04 833 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 CCDC142Q17RM4 750 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 BMT2Q1RMZ1 405 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 FAM78AQ5JUQ0 283 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 SDHAF4Q5VUM1 108 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 TRAPPC11Q7Z392 1133 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 DNAJB7Q7Z6W7 309 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 TMC8Q8IU68 726 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 WDR49Q8IV35 697 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 DCP1BQ8IZD4 617 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 ADGRF2Q8IZF7 708 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 CXorf38Q8TB03 319 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 SHKBP1Q8TBC3 707 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 MMS19Q96T76 1030 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 CGRRF1Q99675 332 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 PI4K2AQ9BTU6 479 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 ATXN3LQ9H3M9 355 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 GDE1Q9NZC3 331 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 MIA3Q5JRA6 1907 aa14.64□□□□□ -0.07
VPS9D1-204ENST00000565023 CACNA1HO95180 2353 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 PRPF40AO75400 957 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 ATF6P18850 670 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 AOC1P19801 751 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 GABRR2P28476 465 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 VIPR2P41587 438 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 TUFMP49411 452 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 CYP4F8P98187 520 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 PSMD6Q15008 389 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 STXBP5Q5T5C0 1151 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 ZSCAN18Q8TBC5 510 aaPredicted RBP14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 SPPL2BQ8TCT7 592 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 TIGD1Q96MW7 591 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 PHOX2BQ99453 314 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 FOXQ1Q9C009 403 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 ZFP14Q9HCL3 533 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 SLC2A4RGQ9NR83 387 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 GTF3C4Q9UKN8 822 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 MAPK8IP1Q9UQF2 711 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 PCDHB5Q9Y5E4 795 aa14.63□□□□□ -0.07
VPS9D1-204ENST00000565023 TICRRQ7Z2Z1 1910 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 PHACTR2O75167 634 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 ECI2O75521 394 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 CST3P01034 146 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 DCNP07585 359 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 PDGFRBP09619 1106 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 HAPLN1P10915 354 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 FCARP24071 287 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 CLCN5P51795 746 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 PSMC1P62191 440 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 SNRPFP62306 86 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 DPYDQ12882 1025 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 PSMD2Q13200 908 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 BIRC3Q13489 604 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 TRPC3Q13507 836 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 SOWAHAQ2M3V2 549 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 INTS6LQ5JSJ4 861 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 CEP135Q66GS9 1140 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 ITIH5Q86UX2 942 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 SCN4BQ8IWT1 228 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 LEMD2Q8NC56 503 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 ZNF516Q92618 1163 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 ATOH1Q92858 354 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 PSMG2Q969U7 264 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 ELMO3Q96BJ8 720 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 ASB16Q96NS5 453 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 PRRX2Q99811 253 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 LRRC3Q9BY71 257 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 GDAP2Q9NXN4 497 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 MYO15AQ9UKN7 3530 aa14.62□□□□□ -0.07
VPS9D1-204ENST00000565023 MAGED2Q9UNF1 606 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms