RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 CBWD3Q5JTY5 395 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 CBWD5Q5RIA9 395 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 LIMS2Q7Z4I7 341 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 TCEAL8Q8IYN2 117 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 SMRP1Q8NCR6 262 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 CMASQ8NFW8 434 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-208ENST00000564703 SLC7A14Q8TBB6 771 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 C2orf15Q8WU43 125 aaKnown RBP17.09■□□□□ 0.33
RAB40C-208ENST00000564703 FAXDC2Q96IV6 333 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 PGLYRP2Q96PD5 576 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 DNAJC25Q9H1X3 360 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 S1PR5Q9H228 398 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 CYP3A43Q9HB55 503 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 COQ4Q9Y3A0 265 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 SYCE3A1L190 88 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 GRXCR2A6NFK2 248 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 CDK11BP21127 795 aaKnown RBP17.08■□□□□ 0.32
RAB40C-208ENST00000564703 ACAT1P24752 427 aaKnown RBP17.08■□□□□ 0.32
RAB40C-208ENST00000564703 ALDH1A3P47895 512 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 TUFMP49411 452 aaKnown RBP17.08■□□□□ 0.32
RAB40C-208ENST00000564703 KCNQ1P51787 676 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 CDH8P55286 799 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 DUSP4Q13115 394 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 SPOPLQ6IQ16 392 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 SCARA5Q6ZMJ2 495 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-208ENST00000564703 GPR149Q86SP6 731 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 ELMOD1Q8N336 334 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 ANKRD20A12PQ8NF67 263 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 OR10T2Q8NGX3 314 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 SMG7Q92540 1137 aaKnown RBP17.08■□□□□ 0.32
RAB40C-208ENST00000564703 SEMA4DQ92854 862 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 NECTIN4Q96NY8 510 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 TMEM209Q96SK2 561 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 RTP3Q9BQQ7 232 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 MRPL45Q9BRJ2 306 aaKnown RBP17.08■□□□□ 0.32
RAB40C-208ENST00000564703 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 NIF3L1Q9GZT8 377 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 SAMSN1Q9NSI8 373 aaKnown RBP17.08■□□□□ 0.32
RAB40C-208ENST00000564703 GTF3C4Q9UKN8 822 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
RAB40C-208ENST00000564703 PCDHB5Q9Y5E4 795 aa17.08■□□□□ 0.32
RAB40C-208ENST00000564703 SMTNL1A8MU46 457 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 KCNJ18B7U540 433 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
RAB40C-208ENST00000564703 RFPL2O75678 378 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 WEE2P0C1S8 567 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 PRKCSHP14314 528 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-208ENST00000564703 LMO2P25791 158 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 HOXA9P31269 272 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 MYL5Q02045 173 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 PLD1Q13393 1074 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 KCNJ12Q14500 433 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 ANO6Q4KMQ2 910 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 INTS6LQ5JSJ4 861 aaKnown RBP17.07■□□□□ 0.32
RAB40C-208ENST00000564703 TJAP1Q5JTD0 557 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 LRRTM3Q86VH5 581 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 OSTM1Q86WC4 334 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 SPATA2LQ8IUW3 424 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-208ENST00000564703 TTC39CQ8N584 583 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 ATAD1Q8NBU5 361 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 SPPL2BQ8TCT7 592 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 KBTBD7Q8WVZ9 684 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 ELMO3Q96BJ8 720 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 TNIP3Q96KP6 325 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 ZNF512Q96ME7 567 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-208ENST00000564703 SYT15Q9BQS2 421 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 TUBGCP2Q9BSJ2 902 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 HSFX1Q9UBD0 423 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 SLC27A5Q9Y2P5 690 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 PLXNA3P51805 1871 aa17.07■□□□□ 0.32
RAB40C-208ENST00000564703 MTMR11A4FU01 709 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 SEC24AO95486 1093 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 BMP1P13497 986 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 PTPN1P18031 435 aaKnown RBP17.06■□□□□ 0.32
RAB40C-208ENST00000564703 EEF1GP26641 437 aaKnown RBP17.06■□□□□ 0.32
RAB40C-208ENST00000564703 EPHB3P54753 998 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 YWHAEP62258 255 aaKnown RBP17.06■□□□□ 0.32
RAB40C-208ENST00000564703 LRMPQ12912 555 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 CBX2Q14781 532 aaPredicted RBP17.06■□□□□ 0.32
RAB40C-208ENST00000564703 SMAD2Q15796 467 aaKnown RBP17.06■□□□□ 0.32
RAB40C-208ENST00000564703 MAN2A1Q16706 1144 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 MGAT5BQ3V5L5 792 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 IQCEQ6IPM2 695 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 C4orf50Q6ZRC1 276 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 UNC93AQ86WB7 457 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 EHBP1Q8NDI1 1231 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 TATDN2Q93075 761 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 NT5C1BQ96P26 610 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 FANCLQ9NW38 375 aa17.06■□□□□ 0.32
RAB40C-208ENST00000564703 ABI2Q9NYB9 513 aaPredicted RBP17.06■□□□□ 0.32
RAB40C-208ENST00000564703 BECN2A8MW95 431 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 CCL16O15467 120 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 PTPN2P17706 415 aa17.05■□□□□ 0.32
RAB40C-208ENST00000564703 TBXAS1P24557 533 aaPredicted RBP17.05■□□□□ 0.32
RAB40C-208ENST00000564703 RAP1GAPP47736 663 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms