RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ANAPC1Q9H1A4 1944 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 PAPSS1O43252 624 aaPredicted RBP11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 FAM155BO75949 473 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 DDAH2O95865 285 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 PRF1P14222 555 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 TUSC3Q13454 348 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 NAA30Q147X3 362 aaPredicted RBP11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 GPR158Q5T848 1215 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 TSHZ3Q63HK5 1081 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 TPGS2Q68CL5 300 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 SPNS3Q6ZMD2 512 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 USP53Q70EK8 1073 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 GAREM2Q75VX8 874 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 CPA6Q8N4T0 437 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 ENAHQ8N8S7 591 aaPredicted RBP11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 CUL5Q93034 780 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 CALCOCO1Q9P1Z2 691 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 PCDHB1Q9Y5F3 818 aa11.86□□□□□ -0.51
HDGFL3-204ENST00000563790 KLRF2D3W0D1 207 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 CBX4O00257 560 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 BCAT2O15382 392 aaPredicted RBP11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 ZNF217O75362 1048 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 KLF8O95600 359 aaPredicted RBP11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 CCT8P50990 548 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 FOSBP53539 338 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 ASIC1P78348 528 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 ILKQ13418 452 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 PDGFRLQ15198 375 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 EOGTQ5NDL2 527 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 MIS18BP1Q6P0N0 1132 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 IGF2-ASQ6U949 168 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 SLC34A3Q8N130 599 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 FAM167AQ96KS9 214 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 ADNPQ9H2P0 1102 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 ECT2Q9H8V3 914 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 HES2Q9Y543 173 aa11.85□□□□□ -0.51
HDGFL3-204ENST00000563790 CKAP5Q14008 2032 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 E2F8A0AVK6 867 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 ANP32CO43423 234 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 ADAM23O75077 832 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 SEMA7AO75326 666 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 LDOC1O95751 146 aaPredicted RBP11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 GABRG2P18507 467 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 KIF5BP33176 963 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 ADRA1BP35368 520 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 CDR1P51861 262 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 INSM1Q01101 510 aaPredicted RBP11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 CLN3Q13286 438 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 TBR1Q16650 682 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 ZSCAN23Q3MJ62 389 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 HSP90AB4PQ58FF6 505 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 KDM7AQ6ZMT4 941 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 CNDP2Q96KP4 475 aaKnown RBP11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 PIGSQ96S52 555 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 SEC62Q99442 399 aaKnown RBP11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 TASP1Q9H6P5 420 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 POLR1BQ9H9Y6 1135 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 AGO4Q9HCK5 861 aaKnown RBP11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 MAFFQ9ULX9 164 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 TGP01266 2768 aa11.84□□□□□ -0.51
HDGFL3-204ENST00000563790 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 A0A1B0GVT2 93 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 CASTOR2A6NHX0 329 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 NDUFS2O75306 463 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 TKTP29401 623 aaKnown RBP11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 UQCRFS1P47985 274 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 CYP4A11Q02928 519 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 TESK1Q15569 626 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 SLC35G1Q2M3R5 365 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 PROX2Q3B8N5 592 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 ARHGAP15Q53QZ3 475 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 KANSL1Q7Z3B3 1105 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 SPATA3Q8NHX4 192 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 IGSF8Q969P0 613 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 MTMR9Q96QG7 549 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 ZKSCAN3Q9BRR0 538 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 EIF2AQ9BY44 585 aaKnown RBP11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 SMG9Q9H0W8 520 aaKnown RBP11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 IFT122Q9HBG6 1241 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 ATXN7L1Q9ULK2 861 aaPredicted RBP11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 CYP8B1Q9UNU6 501 aa11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 COL27A1Q8IZC6 1860 aaPredicted RBP11.83□□□□□ -0.52
HDGFL3-204ENST00000563790 SYNCRIPO60506 623 aaKnown RBP11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 KIF19Q2TAC6 998 aa11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 CAPRIN2Q6IMN6 1127 aaKnown RBP11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 C1orf216Q8TAB5 229 aa11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 KIF1BPQ96EK5 621 aa11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 DNAJC25Q9H1X3 360 aa11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 ATXN3LQ9H3M9 355 aa11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 RIOX1Q9H6W3 641 aa11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 ADAMTS1Q9UHI8 967 aa11.82□□□□□ -0.52
HDGFL3-204ENST00000563790 MEI4A8MW99 385 aa11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 FGF19O95750 216 aa11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 CLCA4Q14CN2 919 aa11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 CC2D1AQ6P1N0 951 aaPredicted RBP11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms