RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ACOT1Q86TX2 421 aa23.33■■□□□ 1.33
LINC01960-201ENST00000563759 ZNF280BQ86YH2 543 aa23.33■■□□□ 1.33
LINC01960-201ENST00000563759 NPAS4Q8IUM7 802 aa23.33■■□□□ 1.33
LINC01960-201ENST00000563759 HASPINQ8TF76 798 aa23.33■■□□□ 1.33
LINC01960-201ENST00000563759 FANCGO15287 622 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 DSC1Q08554 894 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 IFI16Q16666 785 aaKnown RBP23.32■■□□□ 1.32
LINC01960-201ENST00000563759 LIMS2Q7Z4I7 341 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 TMEM35BQ8NCS4 154 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 ZNF653Q96CK0 615 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 KIAA1257Q9ULG3 409 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 DDHD2O94830 711 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 CSF2RAP15509 400 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 ITGB8P26012 769 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 GPC5P78333 572 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 WSCD1Q658N2 575 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 TMEM199Q8N511 208 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 C1orf131Q8NDD1 294 aaKnown RBP23.32■■□□□ 1.32
LINC01960-201ENST00000563759 ARHGEF26Q96DR7 871 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 TRIM11Q96F44 468 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.32■■□□□ 1.32
LINC01960-201ENST00000563759 STXBP5LQ9Y2K9 1186 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 NME7Q9Y5B8 376 aa23.32■■□□□ 1.32
LINC01960-201ENST00000563759 ATMINO43313 823 aaPredicted RBP23.31■■□□□ 1.32
LINC01960-201ENST00000563759 KIF4AO95239 1232 aa23.31■■□□□ 1.32
LINC01960-201ENST00000563759 PDGFRBP09619 1106 aa23.31■■□□□ 1.32
LINC01960-201ENST00000563759 ODC1P11926 461 aa23.31■■□□□ 1.32
LINC01960-201ENST00000563759 WARSP23381 471 aaKnown RBP23.31■■□□□ 1.32
LINC01960-201ENST00000563759 GATMP50440 423 aa23.31■■□□□ 1.32
LINC01960-201ENST00000563759 RHOT2Q8IXI1 618 aa23.31■■□□□ 1.32
LINC01960-201ENST00000563759 TMEM86AQ8N2M4 240 aa23.31■■□□□ 1.32
LINC01960-201ENST00000563759 GTF3C4Q9UKN8 822 aa23.31■■□□□ 1.32
LINC01960-201ENST00000563759 CTAGE9A4FU28 777 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 M0QYV0 167 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 O00370 1275 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 HCRTO43612 131 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 B4GALT3O60512 393 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 OR1G1P47890 313 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 AARSP49588 968 aaKnown RBP eCLIP23.3■■□□□ 1.32
LINC01960-201ENST00000563759 STILQ15468 1287 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 TIGD5Q53EQ6 642 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 MFSD5Q6N075 450 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 DCLRE1AQ6PJP8 1040 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 UBE2Q1Q7Z7E8 422 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 COLGALT2Q8IYK4 626 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 C12orf29Q8N999 325 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 SLC35G2Q8TBE7 412 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 CASD1Q96PB1 797 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 NAPGQ99747 312 aaPredicted RBP23.3■■□□□ 1.32
LINC01960-201ENST00000563759 C11orf70Q9BRQ4 267 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 MRPL9Q9BYD2 267 aaKnown RBP23.3■■□□□ 1.32
LINC01960-201ENST00000563759 ZNF518BQ9C0D4 1074 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 DPEP3Q9H4B8 488 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 FAM49BQ9NUQ9 324 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 PAX3P23760 479 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 LMO2P25791 158 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.3■■□□□ 1.32
LINC01960-201ENST00000563759 MCOLN2Q8IZK6 566 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 CRIPAKQ8N1N5 446 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 TNIP3Q96KP6 325 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 OSGEPQ9NPF4 335 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 CTTNBP2NLQ9P2B4 639 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 DNAJB4Q9UDY4 337 aa23.3■■□□□ 1.32
LINC01960-201ENST00000563759 TBKBP1A7MCY6 615 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 I3L4J1 428 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 MICAL2O94851 1124 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 UPP2O95045 317 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 MYBL1P10243 752 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 BRCC3P46736 316 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 CNGA2Q16280 664 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 DENND1BQ6P3S1 775 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 MON1BQ7L1V2 547 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 PHF13Q86YI8 300 aaPredicted RBP23.29■■□□□ 1.32
LINC01960-201ENST00000563759 RSPH1Q8WYR4 309 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 VWCEQ96DN2 955 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 LHX5Q9H2C1 402 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 ADAM22Q9P0K1 906 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 CNOT8Q9UFF9 292 aaKnown RBP23.29■■□□□ 1.32
LINC01960-201ENST00000563759 PRKAG2Q9UGJ0 569 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 TSPAN16Q9UKR8 245 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 PCDHGC5Q9Y5F6 944 aa23.29■■□□□ 1.32
LINC01960-201ENST00000563759 TIMM13Q9Y5L4 95 aaPredicted RBP23.29■■□□□ 1.32
LINC01960-201ENST00000563759 PALMO75781 387 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 ITGB1P05556 798 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 FAM163BP0C2L3 166 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 CDH5P33151 784 aaPredicted RBP23.28■■□□□ 1.32
LINC01960-201ENST00000563759 MMS22LQ6ZRQ5 1243 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 OSTM1Q86WC4 334 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 PRG3Q9Y2Y8 225 aaPredicted RBP23.28■■□□□ 1.32
LINC01960-201ENST00000563759 ABHD14A-ACY1A0A1B0GW23 586 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 ARHGEF37A1IGU5 675 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 F8W810 466 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 PFKMP08237 780 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 LHX1P48742 406 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 GOLGA7BQ2TAP0 167 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 C2CD6Q53TS8 623 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 PPP1R26Q5T8A7 1209 aaPredicted RBP23.28■■□□□ 1.32
LINC01960-201ENST00000563759 LIN9Q5TKA1 542 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 LCLAT1Q6UWP7 414 aa23.28■■□□□ 1.32
LINC01960-201ENST00000563759 DDX43Q9NXZ2 648 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms