RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 CETN3O15182 167 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 ADAM12O43184 909 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 CALUO43852 315 aaPredicted RBP17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 B3GAT3O94766 335 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 IGFBP6P24592 240 aaPredicted RBP17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 CLCNKBP51801 687 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 YARSP54577 528 aaKnown RBP17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 CKAP4Q07065 602 aaKnown RBP17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 RAD51AP2Q09MP3 1159 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 KIF5AQ12840 1032 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 NFIL3Q16649 462 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 UPP1Q16831 310 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 CCDC122Q5T0U0 273 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 TRIM59Q8IWR1 403 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 TMEM161BQ8NDZ6 487 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 JAKMIP2Q96AA8 810 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 SNX27Q96L92 541 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 KCNK12Q9HB15 430 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 PIDD1Q9HB75 910 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 GOLGA2P5Q9HBQ8 144 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 METTL14Q9HCE5 456 aaKnown RBP17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 IGSF9Q9P2J2 1179 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 EPS15L1Q9UBC2 864 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 KCNG1Q9UIX4 513 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 CACNA1HO95180 2353 aa17.29■□□□□ 0.36
LPCAT4-205ENST00000563748 CTAGE15A4D2H0 777 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 EIF3DO15371 548 aaKnown RBP eCLIP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 CTAGE8P0CG41 777 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 MAPTP10636 758 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 KCNE1P15382 129 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 MCM3P25205 808 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 RPL13P26373 211 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 GBP2P32456 591 aaPredicted RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 CLCN6P51797 869 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 OSTNP61366 133 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 GABPB1Q06547 395 aaPredicted RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 SOX4Q06945 474 aaPredicted RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 TCF15Q12870 199 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 PAPD7Q5XG87 772 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 STXBP4Q6ZWJ1 553 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 CTAGE6Q86UF2 777 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ALYREFQ86V81 257 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 CTAGE4Q8IX94 777 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 MSANTD4Q8NCY6 345 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 C3orf58Q8NDZ4 430 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 HNRNPLLQ8WVV9 542 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 HPS3Q969F9 1004 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ZMAT2Q96NC0 199 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 MYADMQ96S97 322 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 OLFML3Q9NRN5 406 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 SLC38A7Q9NVC3 462 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 MTRRQ9UBK8 725 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 MYO6Q9UM54 1294 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 DUSP12Q9UNI6 340 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 DAAM1Q9Y4D1 1078 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 SLC16A3O15427 465 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 MEFVO15553 781 aaPredicted RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ZRANB2O95218 330 aaKnown RBP eCLIP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 HNRNPA1P09651 372 aaKnown RBP eCLIP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ANXA13P27216 316 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 HOXA9P31269 272 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 NUBP1P53384 320 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 SMTNP53814 917 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 AMPD2Q01433 879 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 STRN3Q13033 797 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 RAB33AQ14088 237 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ARSHQ5FYA8 562 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 IQCEQ6IPM2 695 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ZPBP2Q6X784 338 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 TRIM58Q8NG06 486 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 SCFD1Q8WVM8 642 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 UBE2Q2Q8WVN8 375 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 KCNN1Q92952 543 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 DDX27Q96GQ7 796 aaKnown RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ZBTB45Q96K62 511 aaPredicted RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ACAP3Q96P50 834 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 TCHPQ9BT92 498 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 IRX2Q9BZI1 471 aaPredicted RBP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 CNTN3Q9P232 1028 aa17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.28■□□□□ 0.36
LPCAT4-205ENST00000563748 ATP8B3O60423 1300 aa17.27■□□□□ 0.36
LPCAT4-205ENST00000563748 NPHP3-ACAD11A0A0J9YXS1 232 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 TRAPPC3O43617 180 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 TBCAO75347 108 aaKnown RBP17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 ERLIN1O75477 346 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 TOM1L1O75674 476 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 KNOP1Q1ED39 458 aaKnown RBP17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 TEX35Q5T0J7 233 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 LIN9Q5TKA1 542 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 TRAPPC11Q7Z392 1133 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 CACNA2D4Q7Z3S7 1137 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 LRRN4CLQ8ND94 238 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 MMRN2Q9H8L6 949 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 ARFGAP3Q9NP61 516 aa17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.27■□□□□ 0.35
LPCAT4-205ENST00000563748 RAB21Q9UL25 225 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms