RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 VASNQ6EMK4 673 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 SNRNP48Q6IEG0 339 aaKnown RBP5.2□□□□□ -1.58
CDR2-203ENST00000563573 FAM173BQ6P4H8 233 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 TRMT10BQ6PF06 316 aaKnown RBP5.2□□□□□ -1.58
CDR2-203ENST00000563573 LBX2Q6XYB7 198 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 NEK8Q86SG6 692 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 CIR1Q86X95 450 aaPredicted RBP5.2□□□□□ -1.58
CDR2-203ENST00000563573 KCNG4Q8TDN1 519 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 SMCR8Q8TEV9 937 aaPredicted RBP5.2□□□□□ -1.58
CDR2-203ENST00000563573 MPHOSPH6Q99547 160 aaKnown RBP5.2□□□□□ -1.58
CDR2-203ENST00000563573 TEX13BQ9BXU2 312 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 ZCCHC17Q9NP64 241 aaKnown RBP5.2□□□□□ -1.58
CDR2-203ENST00000563573 DLL4Q9NR61 685 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 CNPY2Q9Y2B0 182 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 RABGAP1Q9Y3P9 1069 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 MYH7BA7E2Y1 1941 aa5.2□□□□□ -1.58
CDR2-203ENST00000563573 BTBD19C9JJ37 291 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 LAD1O00515 517 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 MEIS2O14770 477 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 SPTLC2O15270 562 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 FIBPO43427 364 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 KLF4O43474 513 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 DLX3O60479 287 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 CCNT1O60563 726 aaKnown RBP5.19□□□□□ -1.58
CDR2-203ENST00000563573 PPP6R2O75170 966 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 MBD3O95983 291 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 FGFR1P11362 822 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 MLLT6P55198 1093 aaPredicted RBP5.19□□□□□ -1.58
CDR2-203ENST00000563573 UBE2HP62256 183 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 ZXDAP98168 799 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 SLC39A14Q15043 492 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 ZNF174Q15697 407 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 UBE2SQ16763 222 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 DDR2Q16832 855 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 KIZQ2M2Z5 673 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 LETM2Q2VYF4 491 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 TTC38Q5R3I4 469 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 ADALQ6DHV7 355 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 USP17L6PQ6QN14 398 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 RNF207Q6ZRF8 634 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 RASAL3Q86YV0 1011 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 KBTBD2Q8IY47 623 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 ANKRD35Q8N283 1001 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 LINC00301Q8NCQ3 95 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 ST13P5Q8NFI4 369 aaPredicted RBP5.19□□□□□ -1.58
CDR2-203ENST00000563573 GPRC5AQ8NFJ5 357 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 TBCKQ8TEA7 893 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 LEO1Q8WVC0 666 aaPredicted RBP5.19□□□□□ -1.58
CDR2-203ENST00000563573 ARMC5Q96C12 935 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 MBD6Q96DN6 1003 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 ZSWIM3Q96MP5 696 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 USP28Q96RU2 1077 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 PARK7Q99497 189 aaKnown RBP5.19□□□□□ -1.58
CDR2-203ENST00000563573 AARSD1Q9BTE6 412 aaKnown RBP5.19□□□□□ -1.58
CDR2-203ENST00000563573 PAGR1Q9BTK6 254 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 SPATC1LQ9H0A9 340 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 CDIP1Q9H305 208 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 SEMA4AQ9H3S1 761 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 MROH8Q9H579 483 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 ACAD9Q9H845 621 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 JADE2Q9NQC1 790 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 RNF146Q9NTX7 359 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 TMEM260Q9NX78 707 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 TSC22D4Q9Y3Q8 395 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 CLIC4Q9Y696 253 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 DDX49Q9Y6V7 483 aaKnown RBP5.19□□□□□ -1.58
CDR2-203ENST00000563573 PFASO15067 1338 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 ELP1O95163 1332 aa5.19□□□□□ -1.58
CDR2-203ENST00000563573 MATN3O15232 486 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 STRNO43815 780 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 CUTAO60888 179 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 FBXO21O94952 628 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 GCFC2P16383 781 aaKnown RBP5.18□□□□□ -1.58
CDR2-203ENST00000563573 MCM7P33993 719 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 GRIA2P42262 883 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 TM4SF4P48230 202 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 TOB1P50616 345 aaPredicted RBP5.18□□□□□ -1.58
CDR2-203ENST00000563573 HSD17B4P51659 736 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 GRM1Q13255 1194 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 MOGSQ13724 837 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 BAATQ14032 418 aaPredicted RBP5.18□□□□□ -1.58
CDR2-203ENST00000563573 NPY5RQ15761 445 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 TMEM266Q2M3C6 531 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 EARS2Q5JPH6 523 aaKnown RBP5.18□□□□□ -1.58
CDR2-203ENST00000563573 WDR78Q5VTH9 848 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 ARHGEF16Q5VV41 709 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 ARL6IP4Q66PJ3 421 aaKnown RBP5.18□□□□□ -1.58
CDR2-203ENST00000563573 PPP4R3AQ6IN85 833 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 XRRA1Q6P2D8 792 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 NSMFQ6X4W1 530 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 ANKS3Q6ZW76 656 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 USP53Q70EK8 1073 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 OTOP3Q7RTS5 596 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 LIMS2Q7Z4I7 341 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 SHCBP1Q8NEM2 672 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 REPS2Q8NFH8 660 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 PIP4K2CQ8TBX8 421 aa5.18□□□□□ -1.58
CDR2-203ENST00000563573 HNRNPLLQ8WVV9 542 aaKnown RBP5.18□□□□□ -1.58
CDR2-203ENST00000563573 CLEC4DQ8WXI8 215 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms