RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ERCC6LQ2NKX8 1250 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.08□□□□□ -1.6
SMG1-207ENST00000563235 CCDC40Q4G0X9 1142 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 SULT6B1Q6IMI4 303 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 OGFOD3Q6PK18 319 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 CEP128Q6ZU80 1094 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 TSPYL5Q86VY4 417 aaPredicted RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 MFSD2AQ8NA29 543 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 ZNF507Q8TCN5 953 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 EDC3Q96F86 508 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 FAM129AQ9BZQ8 928 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 SENP6Q9GZR1 1112 aaPredicted RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 NYXQ9GZU5 481 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 SERHL2Q9H4I8 314 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 NOL6Q9H6R4 1146 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 ETNK1Q9HBU6 452 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 MID1IP1Q9NPA3 183 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 IARS2Q9NSE4 1012 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 USP40Q9NVE5 1235 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.08□□□□□ -1.61e-10■■□□□ 11.5
SMG1-207ENST00000563235 SCAF8Q9UPN6 1271 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 TRAF6Q9Y4K3 522 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 SETBP1Q9Y6X0 1596 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 HECW1Q76N89 1606 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 CCDC78A2IDD5 438 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 TAF4O00268 1085 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SH2B2O14492 632 aaPredicted RBP5.07□□□□□ -1.6
SMG1-207ENST00000563235 B4GALT4O60513 344 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 ERLIN1O75477 346 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 TPOP07202 933 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 GHRP10912 638 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 ANXA13P27216 316 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 HTR1BP28222 390 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 ADRA1BP35368 520 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 CCT8P50990 548 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 RAD23AP54725 363 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 B2MP61769 119 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 RPA4Q13156 261 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 DHX34Q14147 1143 aaKnown RBP5.07□□□□□ -1.6
SMG1-207ENST00000563235 FUT11Q495W5 492 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 HS1BP3Q53T59 392 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 TCTE1Q5JU00 501 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 INTS5Q6P9B9 1019 aaKnown RBP5.07□□□□□ -1.6
SMG1-207ENST00000563235 UNC5AQ6ZN44 842 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SV2BQ7L1I2 683 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 ADGRA1Q86SQ6 560 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 FBXW8Q8N3Y1 598 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 TSPYL6Q8N831 410 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 TTC16Q8NEE8 873 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 CDC26Q8NHZ8 85 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 GANCQ8TET4 914 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 AUTS2Q8WXX7 1259 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SYN2Q92777 582 aaPredicted RBP5.07□□□□□ -1.6
SMG1-207ENST00000563235 VWCEQ96DN2 955 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 GAL3ST1Q99999 423 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SIKE1Q9BRV8 207 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SPXQ9BT56 116 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 FUT8Q9BYC5 575 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 IRX2Q9BZI1 471 aaPredicted RBP5.07□□□□□ -1.6
SMG1-207ENST00000563235 ST6GALNAC4Q9H4F1 302 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 DCTPP1Q9H773 170 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SERINC1Q9NRX5 453 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 DZANK1Q9NVP4 752 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SAMD15Q9P1V8 674 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 CACNG4Q9UBN1 327 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 FBXL21Q9UKT6 434 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 VAV3Q9UKW4 847 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 PSME2Q9UL46 239 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 KIAA1257Q9ULG3 409 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 EXOC6BQ9Y2D4 811 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 FAM169AQ9Y6X4 670 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 RAB3GAP2Q9H2M9 1393 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 URADA6NGE7 173 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 RSPH10B2B2RC85 870 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 MGEA5O60502 916 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 PHACTR2O75167 634 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 RECQL4O94761 1208 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 EGFRP00533 1210 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 AFPP02771 609 aaKnown RBP5.07□□□□□ -1.6
SMG1-207ENST00000563235 CYP3A4P08684 503 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 RSPH10BP0C881 870 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 CDK4P11802 303 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 ABCD3P28288 659 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 NNMTP40261 264 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 CAMLGP49069 296 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 MPP7Q5T2T1 576 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SUSD1Q6UWL2 747 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 NSMFQ6X4W1 530 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 RABEPKQ7Z6M1 372 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SGMS1Q86VZ5 419 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 ALDH16A1Q8IZ83 802 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 GPR150Q8NGU9 434 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 IFI44Q8TCB0 444 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 GRIN3AQ8TCU5 1115 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 ATP6V0A1Q93050 837 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 RAB7BQ96AH8 199 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 MVB12AQ96EY5 273 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 BTBD6Q96KE9 485 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 PKP4Q99569 1192 aa5.07□□□□□ -1.6
SMG1-207ENST00000563235 SH3GL3Q99963 347 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms