RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 LINC01599Q8WXQ3 324 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 UBXN4Q92575 508 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 MS4A14Q96JA4 679 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 TRIM7Q9C029 511 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 RGS18Q9NS28 235 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.16■□□□□ 0.66
COMMD4-208ENST00000563220 PDCD11Q14690 1871 aaKnown RBP19.16■□□□□ 0.66
COMMD4-208ENST00000563220 TMEM110-MUSTN1A8MSY1 372 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 O00370 1275 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 MICAL2O94851 1124 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 SV2CQ496J9 727 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 SGO2Q562F6 1265 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 LIN9Q5TKA1 542 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 ACOT1Q86TX2 421 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 CPNE8Q86YQ8 564 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 DNAJC5GQ8N7S2 189 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 OR6B3Q8NGW1 331 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 PGBD4Q96DM1 585 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 L1RE1Q9UN81 338 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 C9IYK1 514 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 KCNK3O14649 394 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 DDX3YO15523 660 aaKnown RBP19.15■□□□□ 0.66
COMMD4-208ENST00000563220 NBNO60934 754 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 SKIP12755 728 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 CLCNKBP51801 687 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 MAMLD1Q13495 774 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 TEX35Q5T0J7 233 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 PLEKHA7Q6IQ23 1121 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 DPH6Q7L8W6 267 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 RABGGTAQ92696 567 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 EPC1Q9H2F5 836 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 KIAA1257Q9ULG3 409 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 CEP83Q9Y592 693 aa19.15■□□□□ 0.66
COMMD4-208ENST00000563220 PQBP1O60828 265 aaKnown RBP19.14■□□□□ 0.65
COMMD4-208ENST00000563220 POMCP01189 267 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 COMTP21964 271 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 LMO2P25791 158 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 ATN1P54259 1190 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-208ENST00000563220 CKAP4Q07065 602 aaKnown RBP19.14■□□□□ 0.65
COMMD4-208ENST00000563220 BFSP2Q13515 415 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 UNC93AQ86WB7 457 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 ERICH1Q86X53 443 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 GOLGA1Q92805 767 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 LPIN3Q9BQK8 851 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 PAAF1Q9BRP4 392 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 DPEP3Q9H4B8 488 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 ANAPC7Q9UJX3 599 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 A8MXQ7 604 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 PODXLO00592 558 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 GJB6O95452 261 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 PDGFRBP09619 1106 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 GNL1P36915 607 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-208ENST00000563220 GPD2P43304 727 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 C1QTNF8P60827 252 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 PTPN20Q4JDL3 420 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 LCLAT1Q6UWP7 414 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 NOA1Q8NC60 698 aaKnown RBP19.14■□□□□ 0.65
COMMD4-208ENST00000563220 APPL2Q8NEU8 664 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 UBA3Q8TBC4 463 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 CRISPLD2Q9H0B8 497 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 UBN1Q9NPG3 1134 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 TJP2Q9UDY2 1190 aa19.14■□□□□ 0.65
COMMD4-208ENST00000563220 TCRBV5S1A1TA0A578 114 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 CASTOR2A6NHX0 329 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 M0QYV0 167 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 HUS1O60921 280 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 CALB1P05937 261 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 FAM189BP81408 668 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 PPP1R26Q5T8A7 1209 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-208ENST00000563220 SLC39A5Q6ZMH5 540 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 SLC24A5Q71RS6 500 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 ZNF572Q7Z3I7 529 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-208ENST00000563220 OSTM1Q86WC4 334 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 C3orf58Q8NDZ4 430 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 PBKQ96KB5 322 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 TSPAN16Q9UKR8 245 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 INPP5FQ9Y2H2 1132 aa19.13■□□□□ 0.65
COMMD4-208ENST00000563220 CES2O00748 559 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 CYB561D2O14569 222 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 RNASE9P60153 205 aaKnown RBP19.12■□□□□ 0.65
COMMD4-208ENST00000563220 CYP4A22Q5TCH4 519 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 ADGRF2Q8IZF7 708 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 CRYBG2Q8N1P7 616 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 TOP6BLQ8N6T0 577 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 ZNF333Q96JL9 665 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 CPXM1Q96SM3 734 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 PARVAQ9NVD7 372 aa19.12■□□□□ 0.65
COMMD4-208ENST00000563220 PFKMP08237 780 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 RPL9P32969 192 aaKnown RBP19.11■□□□□ 0.65
COMMD4-208ENST00000563220 PAFAH1B1P43034 410 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 UPP1Q16831 310 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 CFAP221Q4G0U5 840 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 CCDC181Q5TID7 509 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 DBF4BQ8NFT6 615 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 ALG3Q92685 438 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 KRT35Q92764 455 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 CD101Q93033 1021 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 SENP8Q96LD8 212 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 SNX25Q9H3E2 840 aa19.11■□□□□ 0.65
COMMD4-208ENST00000563220 MRPL47Q9HD33 250 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms