RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 EFHC2Q5JST6 749 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 DCUN1D2Q6PH85 259 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 AGGF1Q8N302 714 aaeCLIP13.8□□□□□ -0.2
USB1-207ENST00000563149 SLC35B2Q8TB61 432 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 ZNF398Q8TD17 642 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 SLC7A3Q8WY07 619 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 INPP5DQ92835 1189 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 FAM84AQ96KN4 292 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 ANKRD27Q96NW4 1050 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 TMEM237Q96Q45 408 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 TARS2Q9BW92 718 aaKnown RBP13.8□□□□□ -0.2
USB1-207ENST00000563149 ACAD9Q9H845 621 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 CYP39A1Q9NYL5 469 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 PNMA3Q9UL41 463 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 STRIP2Q9ULQ0 834 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 C15orf41Q9Y2V0 281 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 PPME1Q9Y570 386 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 IVNS1ABPQ9Y6Y0 642 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 POC1B-GALNT4F8VUJ3 575 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 ZWINTO95229 277 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 ANP32DO95626 131 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 ATP4AP20648 1035 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 GBP2P32456 591 aaPredicted RBP13.79□□□□□ -0.2
USB1-207ENST00000563149 CDKN2BP42772 138 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 ZNF280AP59817 542 aaPredicted RBP13.79□□□□□ -0.2
USB1-207ENST00000563149 ZNF252P-AS1Q0IIN9 211 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 CRYMQ14894 314 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 PKN2Q16513 984 aaKnown RBP13.79□□□□□ -0.2
USB1-207ENST00000563149 DCAF15Q66K64 600 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 OR5B17Q8NGF7 314 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 LRRC8CQ8TDW0 803 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 TMEM143Q96AN5 459 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 VPS37BQ9H9H4 285 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 FBXO40Q9UH90 709 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 ZNF214Q9UL59 606 aaPredicted RBP13.79□□□□□ -0.2
USB1-207ENST00000563149 CEP83Q9Y592 693 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.79□□□□□ -0.2
USB1-207ENST00000563149 DOCK1Q14185 1865 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 PHIPQ8WWQ0 1821 aa13.79□□□□□ -0.2
USB1-207ENST00000563149 IGKV6D-21A0A0A0MT36 114 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 C19orf81C9J6K1 198 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 TYROBPO43914 113 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 POLR2BP30876 1174 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 RASSF2P50749 326 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 GEMIN4P57678 1058 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 SEPT14Q6ZU15 432 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 PRUNE1Q86TP1 453 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ERICH1Q86X53 443 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 PPIL6Q8IXY8 311 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 MAB21L3Q8N8X9 362 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 GLIS1Q8NBF1 620 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ZNF280CQ8ND82 737 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 ALKBH8Q96BT7 664 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 STAMBPL1Q96FJ0 436 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 WNK4Q96J92 1243 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 MCEEQ96PE7 176 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 PAIP2Q9BPZ3 127 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 LRMDAQ9H2I8 198 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 NRBP2Q9NSY0 501 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 MYH9P35579 1960 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 RLFQ13129 1914 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 F8VP50 259 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 ADCY3O60266 1144 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 HNRNPCL1O60812 293 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 SPAG7O75391 227 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 KRT7P08729 469 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ZSCAN5DPP0CG00 497 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 CCNG1P51959 295 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 EFNA5P52803 228 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ARL4CP56559 192 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 SP4Q02446 784 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 PDIA2Q13087 525 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 STXBP2Q15833 593 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 HADHQ16836 314 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 KLHL38Q2WGJ6 581 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 WDR72Q3MJ13 1102 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 HHATQ5VTY9 493 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 FAM47EQ6ZV65 393 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 VSIG1Q86XK7 387 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 THNSL1Q8IYQ7 743 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ANKLE1Q8NAG6 615 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 DNERQ8NFT8 737 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 FNIP1Q8TF40 1166 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 TEX13BQ9BXU2 312 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 NIF3L1Q9GZT8 377 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 MYLK2Q9H1R3 596 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ETNK1Q9HBU6 452 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 ZNF112Q9UJU3 913 aa13.78□□□□□ -0.2
USB1-207ENST00000563149 RPL26L1Q9UNX3 145 aaKnown RBP13.78□□□□□ -0.2
USB1-207ENST00000563149 TELO2Q9Y4R8 837 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms