RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 SPINK2P20155 84 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 CYP3A5P20815 502 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 GABRR2P28476 465 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 ALDH1A3P47895 512 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 GRSF1Q12849 480 aaKnown RBP eCLIP9.06□□□□□ -0.96
CKLF-208ENST00000563092 ORC2Q13416 577 aaPredicted RBP9.06□□□□□ -0.96
CKLF-208ENST00000563092 KARSQ15046 597 aaKnown RBP9.06□□□□□ -0.96
CKLF-208ENST00000563092 PTPAQ15257 358 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 SYT13Q7L8C5 426 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 TMEM150AQ86TG1 271 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 GPIHBP1Q8IV16 184 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 DIS3L2Q8IYB7 885 aaKnown RBP9.06□□□□□ -0.96
CKLF-208ENST00000563092 TMEM130Q8N3G9 435 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 TTC9BQ8N6N2 239 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 ATAD1Q8NBU5 361 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 EZH1Q92800 747 aaPredicted RBP9.06□□□□□ -0.96
CKLF-208ENST00000563092 PGLYRP2Q96PD5 576 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 SLC46A2Q9BY10 475 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 BHMT2Q9H2M3 363 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 ATXN3LQ9H3M9 355 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 C17orf75Q9HAS0 396 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 BRMS1Q9HCU9 246 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 GKN1Q9NS71 199 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 POLR3BQ9NW08 1133 aaPredicted RBP9.06□□□□□ -0.96
CKLF-208ENST00000563092 SLC8A2Q9UPR5 921 aa9.06□□□□□ -0.96
CKLF-208ENST00000563092 RBM19Q9Y4C8 960 aaKnown RBP9.06□□□□□ -0.96
CKLF-208ENST00000563092 SDK1Q7Z5N4 2213 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 TAF4O00268 1085 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 DPYSL4O14531 572 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 FAM189A1O60320 539 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 RNF40O75150 1001 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 TOM1L1O75674 476 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 RHOBTB1O94844 696 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 EGFP01133 1207 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 CYP11A1P05108 521 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 ATF6P18850 670 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 DRD1P21728 446 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 MARCKSP29966 332 aaPredicted RBP9.05□□□□□ -0.96
CKLF-208ENST00000563092 PEX3P56589 373 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 RING1Q06587 406 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 MCL1Q07820 350 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 RUNX3Q13761 415 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 ELF2Q15723 593 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 FBXO43Q4G163 708 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 ARHGAP15Q53QZ3 475 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 DAB2IPQ5VWQ8 1189 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 PMS2CLQ68D20 193 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 NYAP1Q6ZVC0 841 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 ITIH5Q86UX2 942 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 CMTM8Q8IZV2 173 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 C4orf32Q8N8J7 132 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 ERMNQ8TAM6 284 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 RIN3Q8TB24 985 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 ZBTB45Q96K62 511 aaPredicted RBP9.05□□□□□ -0.96
CKLF-208ENST00000563092 ZFRQ96KR1 1074 aaKnown RBP9.05□□□□□ -0.96
CKLF-208ENST00000563092 HHIPQ96QV1 700 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 SCNM1Q9BWG6 230 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 HAPLN2Q9GZV7 340 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 THG1LQ9NWX6 298 aaKnown RBP9.05□□□□□ -0.96
CKLF-208ENST00000563092 SLC27A5Q9Y2P5 690 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 NEUROG3Q9Y4Z2 214 aa9.05□□□□□ -0.96
CKLF-208ENST00000563092 TIMM13Q9Y5L4 95 aaPredicted RBP9.05□□□□□ -0.96
CKLF-208ENST00000563092 GCN1Q92616 2671 aaKnown RBP9.05□□□□□ -0.96
CKLF-208ENST00000563092 SETXQ7Z333 2677 aaKnown RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 UPK3BL1B0FP48 263 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 UPK3BL2E5RIL1 263 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 DCLK1O15075 740 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 SOAT2O75908 522 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 APBB3O95704 486 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 F11P03951 625 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 OR52Z1P0C646 297 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 HMGA1P17096 107 aaKnown RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 PAX3P23760 479 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 CDC25CP30307 473 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 MCM7P33993 719 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 TUFMP49411 452 aaKnown RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 GALK1P51570 392 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 LILRA4P59901 499 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 CREB5Q02930 508 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 FOXC1Q12948 553 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 ZNF268Q14587 947 aaPredicted RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 NAIF1Q69YI7 327 aaPredicted RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 OVOS1Q6IE37 1185 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 ZPBP2Q6X784 338 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 C1orf186Q6ZWK4 172 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 C11orf74Q86VG3 221 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 RASSF3Q86WH2 238 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 NSUN7Q8NE18 718 aaKnown RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 OR10T2Q8NGX3 314 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 SPIRE2Q8WWL2 714 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 USP13Q92995 863 aaPredicted RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 TSPAN18Q96SJ8 248 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 SMG9Q9H0W8 520 aaKnown RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 TMEM9BQ9NQ34 198 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 KIAA1468Q9P260 1216 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 EVLQ9UI08 416 aaPredicted RBP9.04□□□□□ -0.96
CKLF-208ENST00000563092 CCL26Q9Y258 94 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 MSRB2Q9Y3D2 182 aa9.04□□□□□ -0.96
CKLF-208ENST00000563092 IGSF10Q6WRI0 2623 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms