RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 CORO1BQ9BR76 489 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 SMOC2Q9H3U7 446 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 PTPRDP23468 1912 aa16.5■□□□□ 0.23
CCNDBP1-203ENST00000562553 PSMC2P35998 433 aaKnown RBP16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 AP3M2P53677 418 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 TSPY1Q01534 308 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 MORC3Q14149 939 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 CAMK4Q16566 473 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 ZACNQ401N2 412 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 SV2AQ7L0J3 742 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 ZC3H3Q8IXZ2 948 aaKnown RBP16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 HS6ST3Q8IZP7 471 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 ING5Q8WYH8 240 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 MMS19Q96T76 1030 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 PKMYT1Q99640 499 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 ACBD6Q9BR61 282 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 MRPL45Q9BRJ2 306 aaKnown RBP16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 EPS15L1Q9UBC2 864 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 NME7Q9Y5B8 376 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 PIEZO1Q92508 2521 aa16.49■□□□□ 0.23
CCNDBP1-203ENST00000562553 STAU1O95793 577 aaKnown RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 LAMP2P13473 410 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 PTPN2P17706 415 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 WARSP23381 471 aaKnown RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 LMO2P25791 158 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 CCR2P41597 374 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 LHX1P48742 406 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 MYL7Q01449 175 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 PPP3CAQ08209 521 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 NCOA4Q13772 614 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 ZNF699Q32M78 642 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 WDR72Q3MJ13 1102 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 PRSS36Q5K4E3 855 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 POTEHQ6S545 545 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 INTS8Q75QN2 995 aaKnown RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 DPH6Q7L8W6 267 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 DCP1BQ8IZD4 617 aaKnown RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 SPATA18Q8TC71 538 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 RSAD2Q8WXG1 361 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 FGF13Q92913 245 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 TCEAL4Q96EI5 215 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 SEPT5Q99719 369 aaPredicted RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 TSG101Q99816 390 aa16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 GTPBP4Q9BZE4 634 aaKnown RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 ABI2Q9NYB9 513 aaPredicted RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 NXF1Q9UBU9 619 aaKnown RBP16.48■□□□□ 0.23
CCNDBP1-203ENST00000562553 TMEM221A6NGB7 291 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 PPP1R3GB7ZBB8 358 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 M0R296 226 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 PSMA7O14818 248 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 IKBKBO14920 756 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 CETN3O15182 167 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 ATP2C2O75185 946 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 KRT13P13646 458 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 CEBPBP17676 345 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 ATF6P18850 670 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 CCNE1P24864 410 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 ATICP31939 592 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 GCLMP48507 274 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 PSMC1P62191 440 aaKnown RBP16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 TNNC1P63316 161 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 MGAT5BQ3V5L5 792 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 KLHL10Q6JEL2 608 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 ELMOD1Q8N336 334 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 SPPL2BQ8TCT7 592 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 LPIN3Q9BQK8 851 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 SYT15Q9BQS2 421 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 MKNK1Q9BUB5 465 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 MMRN2Q9H8L6 949 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 VRTNQ9H8Y1 702 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 KCNK12Q9HB15 430 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 AVENQ9NQS1 362 aaPredicted RBP16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 CDH7Q9ULB5 785 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 SORCS3Q9UPU3 1222 aa16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 MRPS23Q9Y3D9 190 aaKnown RBP16.47■□□□□ 0.23
CCNDBP1-203ENST00000562553 MYBPHLA2RUH7 354 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 TACC1O75410 805 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 MOSPD3O75425 235 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 CLSTN1O94985 981 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 HLA-DRAP01903 254 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 PDGFRBP09619 1106 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 HAPLN1P10915 354 aaPredicted RBP16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 EPB41P11171 864 aaKnown RBP16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 PCSK1P29120 753 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 PIK3CAP42336 1068 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 RAP1GAPP47736 663 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 ALDH1A3P47895 512 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 GPR15P49685 360 aa16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 MCCD1P59942 119 aaPredicted RBP16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 FKBP3Q00688 224 aaKnown RBP16.46■□□□□ 0.23
CCNDBP1-203ENST00000562553 LRRC63Q05C16 580 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms