RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 TLE1Q04724 770 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 PPFIA1Q13136 1202 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 SLC14A1Q13336 389 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ARHGAP40Q5TG30 622 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 KCNV1Q6PIU1 500 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 SPATA31D4Q6ZUB0 917 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 C11orf74Q86VG3 221 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 STK11IPQ8N1F8 1099 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 MINDY1Q8N5J2 469 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 LRRN4CLQ8ND94 238 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 RGS22Q8NE09 1264 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ZBTB10Q96DT7 871 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 GTPBP2Q9BX10 602 aaKnown RBP6.76□□□□□ -1.33
TCF4-213ENST00000562543 RXFP1Q9HBX9 757 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 FSCN3Q9NQT6 498 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 DISC1Q9NRI5 854 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ATP8A2Q9NTI2 1148 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 TMEM74BQ9NUR3 256 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 SLC8A2Q9UPR5 921 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 PLIN4Q96Q06 1357 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 ABCB11O95342 1321 aa6.76□□□□□ -1.33
TCF4-213ENST00000562543 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
TCF4-213ENST00000562543 TGM5O43548 720 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 PRKAB2O43741 272 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 RNGTTO60942 597 aaKnown RBP6.75□□□□□ -1.33
TCF4-213ENST00000562543 RPS6KA5O75582 802 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 MCCP23508 829 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 AK2P54819 239 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 SEMG2Q02383 582 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 CCDC173Q0VFZ6 552 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 SMAD1Q15797 465 aaKnown RBP6.75□□□□□ -1.33
TCF4-213ENST00000562543 ECM1Q16610 540 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 CCDC158Q5M9N0 1113 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 RCSD1Q6JBY9 416 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 LILRA6Q6PI73 481 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 ATG4DQ86TL0 474 aaPredicted RBP6.75□□□□□ -1.33
TCF4-213ENST00000562543 AMOTL1Q8IY63 956 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 OR2I1PQ8NGU4 316 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 PI4K2BQ8TCG2 481 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
TCF4-213ENST00000562543 TMEM40Q8WWA1 233 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 CHMP4CQ96CF2 233 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 RMDN3Q96TC7 470 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 DNAJC2Q99543 621 aaKnown RBP6.75□□□□□ -1.33
TCF4-213ENST00000562543 TRMT61BQ9BVS5 477 aaKnown RBP6.75□□□□□ -1.33
TCF4-213ENST00000562543 ANTXR1Q9H6X2 564 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 MLXIPQ9HAP2 919 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 CPNE5Q9HCH3 593 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 PRDM7Q9NQW5 492 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 STARD5Q9NSY2 213 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 GDE1Q9NZC3 331 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 ST3GAL5Q9UNP4 418 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 GTF3C3Q9Y5Q9 886 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 PTPRDP23468 1912 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 WDR19Q8NEZ3 1342 aa6.75□□□□□ -1.33
TCF4-213ENST00000562543 KIAA1549LQ6ZVL6 1849 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 DBX1A6NMT0 343 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 B4E1Z4 1266 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 NOP56O00567 594 aaKnown RBP6.74□□□□□ -1.33
TCF4-213ENST00000562543 URODP06132 367 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 TGFB3P10600 412 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 BCKDHBP21953 392 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 GDI1P31150 447 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 SOX9P48436 509 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 DHPSP49366 369 aaPredicted RBP6.74□□□□□ -1.33
TCF4-213ENST00000562543 UCNP55089 124 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 RNASELQ05823 741 aaKnown RBP6.74□□□□□ -1.33
TCF4-213ENST00000562543 BTNL9Q6UXG8 535 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 ECHDC2Q86YB7 292 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 SYT12Q8IV01 421 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 SRRM1Q8IYB3 904 aaKnown RBP6.74□□□□□ -1.33
TCF4-213ENST00000562543 SMYD4Q8IYR2 804 aaPredicted RBP6.74□□□□□ -1.33
TCF4-213ENST00000562543 MMP21Q8N119 569 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 BAHD1Q8TBE0 780 aaPredicted RBP6.74□□□□□ -1.33
TCF4-213ENST00000562543 ING5Q8WYH8 240 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 HERC2P3Q9BVR0 1158 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 BCL11AQ9H165 835 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 NRDE2Q9H7Z3 1164 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 CAPN10Q9HC96 672 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 ABCB6Q9NP58 842 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 EBF1Q9UH73 591 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 PCOLCE2Q9UKZ9 415 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 BRPF3Q9ULD4 1205 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 KCNH3Q9ULD8 1083 aa6.74□□□□□ -1.33
TCF4-213ENST00000562543 FN1P02751 2386 aaKnown RBP6.74□□□□□ -1.33
TCF4-213ENST00000562543 PCSK5Q92824 1860 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 MYBPHLA2RUH7 354 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 SOD2P04179 222 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 HNRNPA1P09651 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
TCF4-213ENST00000562543 PDE6AP16499 860 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 SLC11A1P49279 550 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 ID3Q02535 119 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 AP3B2Q13367 1082 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 C2orf27AQ580R0 203 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 ODR4Q5SWX8 454 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 UTP14CQ5TAP6 766 aaKnown RBP6.73□□□□□ -1.33
TCF4-213ENST00000562543 CTR9Q6PD62 1173 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 VITQ6UXI7 678 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 SPOCD1Q6ZMY3 1216 aa6.73□□□□□ -1.33
TCF4-213ENST00000562543 FAM228AQ86W67 206 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms