RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 ELMOD1Q8N336 334 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 MLKLQ8NB16 471 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 OR10T2Q8NGX3 314 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 ACSF2Q96CM8 615 aaPredicted RBP17.59■□□□□ 0.41
PKD1-226ENST00000562425 EEF2KMTQ96G04 330 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 ACBD6Q9BR61 282 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 IMPG2Q9BZV3 1241 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 VRTNQ9H8Y1 702 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 WDR6Q9NNW5 1121 aaKnown RBP17.59■□□□□ 0.41
PKD1-226ENST00000562425 DDX43Q9NXZ2 648 aaKnown RBP17.59■□□□□ 0.41
PKD1-226ENST00000562425 ARMCX3Q9UH62 379 aaPredicted RBP17.59■□□□□ 0.41
PKD1-226ENST00000562425 CDH22Q9UJ99 828 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 INSL5Q9Y5Q6 135 aa17.59■□□□□ 0.41
PKD1-226ENST00000562425 MTCL1Q9Y4B5 1905 aaKnown RBP17.59■□□□□ 0.41
PKD1-226ENST00000562425 LOC730098B7Z3J9 87 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 GABRDO14764 452 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 CCL16O15467 120 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 SEC24AO95486 1093 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 MBD3O95983 291 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 TRIM49P0CI25 452 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 TRIM49CP0CI26 452 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 GCLMP48507 274 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 NFE2Q16621 373 aaPredicted RBP17.58■□□□□ 0.4
PKD1-226ENST00000562425 ZNF699Q32M78 642 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 SLC39A12Q504Y0 691 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 C1orf220Q5T0J3 134 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 LIMS2Q7Z4I7 341 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 PLCD3Q8N3E9 789 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 CCDC150Q8NCX0 1101 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 PGLYRP2Q96PD5 576 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 RTP3Q9BQQ7 232 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 XYLT2Q9H1B5 865 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 SNX25Q9H3E2 840 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 TMEM8AQ9HCN3 771 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 NXF1Q9UBU9 619 aaKnown RBP17.58■□□□□ 0.4
PKD1-226ENST00000562425 CTNND2Q9UQB3 1225 aa17.58■□□□□ 0.4
PKD1-226ENST00000562425 CLUHO75153 1309 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 MTMR11A4FU01 709 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 TACC1O75410 805 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 GNA14O95837 355 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 PTPN2P17706 415 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 WARSP23381 471 aaKnown RBP17.57■□□□□ 0.4
PKD1-226ENST00000562425 PIK3CAP42336 1068 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 ALDH1A3P47895 512 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 TUFMP49411 452 aaKnown RBP17.57■□□□□ 0.4
PKD1-226ENST00000562425 DUSP4Q13115 394 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 TCERG1LQ5VWI1 586 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 KRT39Q6A163 491 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 IQCEQ6IPM2 695 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 TTI2Q6NXR4 508 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 GRASPQ7Z6J2 395 aaPredicted RBP17.57■□□□□ 0.4
PKD1-226ENST00000562425 FRMD5Q7Z6J6 570 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 TDRD5Q8NAT2 981 aaKnown RBP17.57■□□□□ 0.4
PKD1-226ENST00000562425 SPPL2BQ8TCT7 592 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 ZNF512Q96ME7 567 aaPredicted RBP17.57■□□□□ 0.4
PKD1-226ENST00000562425 TMEM209Q96SK2 561 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 DACH1Q9UI36 760 aa17.57■□□□□ 0.4
PKD1-226ENST00000562425 VNN1O95497 513 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 HLA-DRAP01903 254 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 GNL1P36915 607 aaPredicted RBP17.56■□□□□ 0.4
PKD1-226ENST00000562425 STX17P56962 302 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 PPP3CAQ08209 521 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 MAPRE1Q15691 268 aaKnown RBP17.56■□□□□ 0.4
PKD1-226ENST00000562425 CCDC40Q4G0X9 1142 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 DCAF17Q5H9S7 520 aaPredicted RBP17.56■□□□□ 0.4
PKD1-226ENST00000562425 INTS6LQ5JSJ4 861 aaKnown RBP17.56■□□□□ 0.4
PKD1-226ENST00000562425 TRIM67Q6ZTA4 783 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 ATAD1Q8NBU5 361 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 DUSP9Q99956 384 aaKnown RBP17.56■□□□□ 0.4
PKD1-226ENST00000562425 MMRN2Q9H8L6 949 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.56■□□□□ 0.4
PKD1-226ENST00000562425 RWDD2AQ9UIY3 292 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 CDH9Q9ULB4 789 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 PCDHB5Q9Y5E4 795 aa17.56■□□□□ 0.4
PKD1-226ENST00000562425 TMEM221A6NGB7 291 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 M0R296 226 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 ASS1P00966 412 aaKnown RBP17.55■□□□□ 0.4
PKD1-226ENST00000562425 FSHRP23945 695 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 MXI1P50539 228 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 EPHB3P54753 998 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 PTPN5P54829 565 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 TWF1Q12792 350 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 PABPC1LQ4VXU2 614 aaKnown RBP17.55■□□□□ 0.4
PKD1-226ENST00000562425 LRRTM3Q86VH5 581 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 OSTM1Q86WC4 334 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 ZDHHC14Q8IZN3 488 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 LEMD2Q8NC56 503 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 OR6B3Q8NGW1 331 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 GPT2Q8TD30 523 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 KBTBD7Q8WVZ9 684 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 SLC27A5Q9Y2P5 690 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 YIPF1Q9Y548 306 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 ASB3Q9Y575 518 aa17.55■□□□□ 0.4
PKD1-226ENST00000562425 ZFP37Q9Y6Q3 630 aaPredicted RBP17.55■□□□□ 0.4
PKD1-226ENST00000562425 C2CD4DB7Z1M9 353 aa17.54■□□□□ 0.4
PKD1-226ENST00000562425 VNN2O95498 520 aa17.54■□□□□ 0.4
PKD1-226ENST00000562425 SP100P23497 879 aaPredicted RBP17.54■□□□□ 0.4
PKD1-226ENST00000562425 ACAT1P24752 427 aaKnown RBP17.54■□□□□ 0.4
PKD1-226ENST00000562425 GBP2P32456 591 aaPredicted RBP17.54■□□□□ 0.4
PKD1-226ENST00000562425 NLRP12P59046 1061 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms